Tissue expression of PRELID3B - Summary - The Human Protein Atlas

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PRELID3B

TISSUE

CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	PRELID3B
Gene description	PRELI domain containing 3B
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	2
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Expressed in all
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Ubiquitous cytoplasmic expression.

DATA RELIABILITY
Data reliability description	Antibody staining mainly consistent with RNA expression data. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA047721
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	PRELID3B (HGNC Symbol)
Synonyms	C20orf45, dJ543J19.5, SLMO2
Description	PRELI domain containing 3B (HGNC Symbol)
Entrez gene summary
Chromosome	20
Cytoband	q13.32
Chromosome location (bp)	59033145 - 59042909
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000101166 (version 83.38)
Entrez gene	51012
UniProt	Q9Y3B1 (UniProt - Evidence at transcript level)
neXtProt	NX_Q9Y3B1
Antibodypedia	PRELID3B antibodies

PROTEIN BROWSER

PRELID3B-001	PRELID3B-002

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
PRELID3B-001 ENSP00000360072 ENST00000371033	Q9Y3B1 [Direct mapping] Protein slowmo homolog 2 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005758 [mitochondrial intermembrane space] GO:0015914 [phospholipid transport] GO:1990050 [phosphatidic acid transporter activity] Show all	164 aa 18.2 kDa	No	0
PRELID3B-002 ENSP00000348206 ENST00000355937	Q9Y3B1 [Direct mapping] Protein slowmo homolog 2 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005739 [mitochondrion] GO:0005758 [mitochondrial intermembrane space] GO:0015914 [phospholipid transport] GO:1990050 [phosphatidic acid transporter activity] Show all	194 aa 21.5 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.