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CDK5RAP1

COLON - Expression summary

RNA expression
HPA:8.9TPM
GTEx:10.0RPKM
FANTOM5:15.8Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

8.9
overview Male, age 54 Sample 1
TPM: 6.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 5.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 4.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 11.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 13.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 10.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 11.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 12.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 12.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 11.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 6.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

10.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.9
Samples: 149

Max RPKM: 14.1
Min RPKM: 6.7
Std RPKM: 1.5
Median RPKM: 9.8
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 14.1
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 13.6
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 13.3
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 13.1
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 13.1
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 13.0
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 12.8
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 12.7
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 12.6
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 12.6
Show all
Colon - Transverse
RPKM: 10.1
Samples: 196

Max RPKM: 15.7
Min RPKM: 2.9
Std RPKM: 1.6
Median RPKM: 10.1
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 15.7
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 14.6
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 14.3
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 14.2
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 14.0
GTEX-1128S-1626-SM-5H12O 60-69 years, female 13.9
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 13.8
GTEX-QMRM-1226-SM-447C6 50-59 years, male 13.7
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 13.4
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 13.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

15.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 15.8
FF:10014-101C5 62,83,84 years, mixed 15.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.