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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:1269.6TPM
GTEx:435.1RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:Low
Neuronal cells:High
Neuropil:Medium
 

Antibody staining

Antibody HPA013143

 

Antibody CAB000118

 

Endothelial cells

Medium   High  

Glial cells

Medium   Low  

Neuronal cells

High   High  

Neuropil

Medium   Medium  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

1269.6

N/A Male, age 5 Sample 1
TPM: 2081.6
overview Female, age 40 Sample 2
TPM: 883.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70 Sample 3
TPM: 843.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

435.1

GTEx sample id

Sample description

RPKM

Brain - Cortex
RPKM: 452.6
Samples: 114

Max RPKM: 1088.0
Min RPKM: 85.1
Std RPKM: 189.9
Median RPKM: 431.6
GTEX-11GSP-3226-SM-5986O 60-69 years, female 1088.0
GTEX-13OVJ-2826-SM-5L3GW 50-59 years, female 1056.7
GTEX-ZE7O-3126-SM-5HL5X 50-59 years, female 1043.7
GTEX-13OW7-3026-SM-5L3GY 50-59 years, male 935.1
GTEX-1445S-3026-SM-5O9BR 60-69 years, male 890.7
GTEX-11OC5-0726-SM-5P9JK 60-69 years, male 863.1
GTEX-12WSD-3126-SM-5HL7P 60-69 years, female 786.2
GTEX-1399T-3026-SM-5KLZC 60-69 years, male 777.7
GTEX-11EMC-3226-SM-5EGKW 60-69 years, female 701.0
GTEX-1192X-3126-SM-5N9BY 50-59 years, male 682.9
GTEX-139T8-1026-SM-5J2MC 60-69 years, male 676.8
GTEX-11TTK-2926-SM-5PNYP 60-69 years, female 675.4
GTEX-131XW-3126-SM-5LZUC 50-59 years, female 672.2
GTEX-13OW6-3026-SM-5J2MI 50-59 years, male 663.8
GTEX-13JVG-3126-SM-5L3FH 60-69 years, male 645.1
GTEX-12ZZZ-3026-SM-5BC67 60-69 years, male 643.9
GTEX-145MF-2726-SM-5O995 50-59 years, male 641.7
GTEX-144FL-3026-SM-5O99C 50-59 years, male 632.5
GTEX-1117F-3226-SM-5N9CT 60-69 years, female 616.6
GTEX-13JUV-2926-SM-5LZX7 40-49 years, female 600.9
GTEX-ZVT3-3026-SM-5E43N 60-69 years, female 578.0
GTEX-13PVQ-3026-SM-5SI93 50-59 years, male 573.9
GTEX-145MG-3026-SM-5RQJA 50-59 years, male 569.0
GTEX-11GSO-2926-SM-5HL73 60-69 years, male 543.1
GTEX-11ONC-2926-SM-5P9JM 60-69 years, male 536.6
GTEX-11NUK-2926-SM-5A5MD 50-59 years, male 534.1
GTEX-13FHO-3026-SM-5J1O9 60-69 years, male 529.0
GTEX-14ASI-3026-SM-5S2PN 60-69 years, male 526.4
GTEX-11NV4-2126-SM-5N9DS 60-69 years, male 525.8
GTEX-11EI6-3026-SM-5GZZO 60-69 years, male 525.7
GTEX-RU72-3026-SM-5SI7Y 50-59 years, female 525.1
GTEX-13OW8-2826-SM-5L3GC 60-69 years, male 523.1
GTEX-13X6K-2926-SM-5Q5D5 60-69 years, female 512.0
GTEX-13QIC-2926-SM-5J2NF 60-69 years, female 511.6
GTEX-YJ89-3026-SM-5IFJI 60-69 years, male 508.8
GTEX-13O3Q-2926-SM-5KM45 50-59 years, male 499.9
GTEX-13S7M-3126-SM-5RQJQ 60-69 years, female 498.5
GTEX-13O3O-3126-SM-5KM3H 60-69 years, female 497.2
GTEX-14BMV-3026-SM-5S2PQ 50-59 years, male 495.8
GTEX-11WQK-3026-SM-5EQL6 50-59 years, male 493.3
GTEX-WHSE-3026-SM-3P5ZH 20-29 years, male 490.7
GTEX-147GR-3026-SM-5S2ML 60-69 years, male 490.6
GTEX-144GL-3026-SM-5Q5CW 50-59 years, male 488.0
GTEX-QVUS-2826-SM-3GADB 60-69 years, female 483.9
GTEX-Y8DK-0826-SM-4TT3T 60-69 years, male 483.3
GTEX-11PRG-2926-SM-5987A 50-59 years, male 481.4
GTEX-13IVO-2926-SM-5L3CZ 70-79 years, male 480.3
GTEX-Y111-2726-SM-4TT3N 50-59 years, male 480.2
GTEX-13NYB-3026-SM-5IJD7 40-49 years, male 475.6
GTEX-12WSC-3026-SM-5GCNF 50-59 years, male 471.6
GTEX-12ZZW-2926-SM-5LZUP 50-59 years, male 463.1
GTEX-R55F-1326-SM-5S2V4 50-59 years, male 460.2
GTEX-Q2AG-2926-SM-2HMJ3 40-49 years, female 452.7
GTEX-12126-1026-SM-5P9JJ 20-29 years, male 449.9
GTEX-1128S-2726-SM-5H12C 60-69 years, female 435.8
GTEX-PWO3-0926-SM-2I5EY 60-69 years, female 433.7
GTEX-13SLX-3126-SM-5S2Q5 50-59 years, female 432.0
GTEX-XOTO-3026-SM-4B65M 50-59 years, male 431.1
GTEX-13X6J-3026-SM-5Q5CU 50-59 years, male 429.5
GTEX-11DXY-3226-SM-5GIDE 60-69 years, male 425.9
GTEX-13OVH-3026-SM-5MR4N 70-79 years, male 422.0
GTEX-YFC4-3126-SM-5PNV6 40-49 years, female 420.9
GTEX-11GS4-3126-SM-5A5LH 60-69 years, male 420.1
GTEX-11DXW-1126-SM-5H12Q 40-49 years, male 419.4
GTEX-14A5I-2926-SM-5Q5CQ 50-59 years, female 411.9
GTEX-WZTO-2926-SM-3NM9I 40-49 years, male 406.7
GTEX-131YS-3126-SM-5KLYT 60-69 years, female 402.2
GTEX-145LS-3126-SM-5Q5BY 60-69 years, female 397.4
GTEX-13FHP-3026-SM-5IJBS 50-59 years, male 396.1
GTEX-13FXS-3126-SM-5J2NN 50-59 years, male 394.1
GTEX-ZYFD-3026-SM-5E44C 50-59 years, male 389.3
GTEX-ZAK1-3026-SM-5S2MJ 50-59 years, female 381.9
GTEX-11O72-2926-SM-5BC4V 40-49 years, male 381.2
GTEX-13PL6-3126-SM-5LUAR 40-49 years, female 378.1
GTEX-13FLW-1426-SM-5K7YE 50-59 years, male 377.9
GTEX-12WSA-2926-SM-5EQ4D 60-69 years, male 373.5
GTEX-12WSH-3026-SM-5CVNI 50-59 years, male 369.0
GTEX-OXRN-2426-SM-2I5EQ 50-59 years, male 368.6
GTEX-12ZZX-2926-SM-5GCOQ 40-49 years, female 366.9
GTEX-T5JC-2426-SM-3NMDB 20-29 years, male 363.6
GTEX-12ZZY-3026-SM-5GCOU 60-69 years, male 354.6
GTEX-XLM4-3026-SM-4AT6L 60-69 years, male 350.2
GTEX-13NYC-2826-SM-5K7WR 60-69 years, male 341.9
GTEX-132Q8-3026-SM-5PNVG 60-69 years, male 341.6
GTEX-ZUA1-3026-SM-59HJC 40-49 years, male 325.2
GTEX-NPJ7-2726-SM-2I3FT 60-69 years, female 324.5
GTEX-WWYW-3126-SM-3NB39 50-59 years, female 320.8
GTEX-WVLH-3026-SM-3MJG9 50-59 years, male 318.2
GTEX-111FC-3126-SM-5GZZ2 60-69 years, male 307.1
GTEX-117XS-3026-SM-5N9CA 60-69 years, male 300.3
GTEX-QDT8-2926-SM-32PKC 30-39 years, female 300.0
GTEX-145MH-3026-SM-5Q5DZ 50-59 years, male 290.7
GTEX-RNOR-2326-SM-2TF4I 50-59 years, female 288.4
GTEX-1313W-3126-SM-5LZUI 50-59 years, female 286.6
GTEX-ZZPT-3026-SM-5GZXH 50-59 years, male 280.2
GTEX-T6MN-2626-SM-32PMQ 50-59 years, male 276.6
GTEX-13G51-3026-SM-5IJB8 60-69 years, male 275.2
GTEX-X4XX-3026-SM-3NMB2 60-69 years, male 269.3
GTEX-13VXU-2926-SM-5LU5C 50-59 years, male 267.1
GTEX-QVJO-1426-SM-2S1QY 60-69 years, female 261.8
GTEX-X585-3026-SM-46MWF 50-59 years, male 257.3
GTEX-NPJ8-1526-SM-2D7VU 40-49 years, male 241.8
GTEX-13NYS-3126-SM-5KLYV 60-69 years, male 236.5
GTEX-TSE9-3026-SM-3DB76 60-69 years, female 236.0
GTEX-N7MT-1126-SM-5SI7V 60-69 years, female 220.6
GTEX-11ZUS-2926-SM-5FQSL 30-39 years, male 219.0
GTEX-QMR6-1426-SM-32PLA 50-59 years, male 209.5
GTEX-ZAJG-3126-SM-5HL9J 50-59 years, female 198.5
GTEX-Z93S-2926-SM-57WB9 50-59 years, male 193.5
GTEX-T2IS-3026-SM-32QPM 20-29 years, female 163.0
GTEX-WL46-2926-SM-3LK82 50-59 years, male 153.4
GTEX-UTHO-3026-SM-3GAFB 60-69 years, male 115.4
GTEX-PVOW-2526-SM-2XCF7 40-49 years, male 107.5
GTEX-11OF3-2926-SM-5HL78 60-69 years, male 85.1
Show all
Brain - Frontal Cortex (BA9)
RPKM: 416.6
Samples: 108

Max RPKM: 1269.8
Min RPKM: 70.7
Std RPKM: 228.5
Median RPKM: 366.8
GTEX-12WSD-0011-R10b-SM-5GU79 60-69 years, female 1269.8
GTEX-13OVJ-0011-R10b-SM-5L3HT 50-59 years, female 1158.0
GTEX-1445S-0011-R10a-SM-5PNWB 60-69 years, male 1106.5
GTEX-131XW-0011-R10a-SM-5DUVA 50-59 years, female 1017.4
GTEX-ZV68-0011-R10a-SM-51MT7 50-59 years, female 979.0
GTEX-139TS-0011-R10a-SM-5K7TU 60-69 years, male 868.1
GTEX-13OW8-0011-R10a-SM-5L3H6 60-69 years, male 838.3
GTEX-11GSP-0011-R10a-SM-5NQ7J 60-69 years, female 761.4
GTEX-13OW7-0011-R10a-SM-5L3H3 50-59 years, male 694.7
GTEX-11WQC-0011-R10a-SM-57WCT 60-69 years, male 694.0
GTEX-13O3O-0011-R10a-SM-5LUA9 60-69 years, female 692.5
GTEX-13OW6-0011-R10a-SM-5L3HE 50-59 years, male 690.8
GTEX-13FLV-0011-R10b-SM-5LZZ2 50-59 years, male 690.3
GTEX-13SLW-0011-R10a-SM-5S2UI 70-79 years, male 681.6
GTEX-145LU-0011-R10a-SM-5PNWJ 50-59 years, male 670.0
GTEX-13JVG-0011-R10b-SM-5KM2P 60-69 years, male 657.0
GTEX-147GR-0011-R10b-SM-5S2UM 60-69 years, male 612.6
GTEX-13JUV-0011-R10b-SM-5LZXR 40-49 years, female 605.6
GTEX-1477Z-0011-R10b-SM-5S2RF 60-69 years, male 600.0
GTEX-13FXS-0011-R10a-SM-5J2MA 50-59 years, male 580.0
GTEX-X261-0011-R10B-SM-4E3JT 50-59 years, male 578.8
GTEX-147F4-0011-R10b-SM-5S2WC 50-59 years, male 573.7
GTEX-11WQK-0011-R10a-SM-5BC6R 50-59 years, male 568.8
GTEX-13OVL-0011-R10a-SM-5L3GS 50-59 years, male 560.9
GTEX-11H98-0011-R10b-SM-5NQ98 50-59 years, male 557.7
GTEX-13FTZ-0011-R10b-SM-5KLZS 60-69 years, male 552.9
GTEX-ZUA1-0011-R10a-SM-51MT6 40-49 years, male 546.8
GTEX-14753-0011-R10b-SM-5S2WE 60-69 years, male 542.4
GTEX-12ZZY-0011-R10b-SM-5HL7W 60-69 years, male 541.6
GTEX-OXRO-0011-R10A-SM-2I5EH 60-69 years, female 509.5
GTEX-14BIL-0011-R10a-SM-5SI75 50-59 years, male 496.8
GTEX-13N2G-0011-R10a-SM-5MR34 60-69 years, male 479.1
GTEX-13FHO-0011-R10b-SM-5J2MM 60-69 years, male 476.1
GTEX-13NZA-0011-R10b-SM-5KM54 60-69 years, male 473.6
GTEX-14ASI-0011-R10b-SM-5S2VZ 60-69 years, male 468.6
GTEX-13SLX-0011-R10a-SM-5P9HV 50-59 years, female 462.2
GTEX-12126-0011-R10b-SM-5BC6T 20-29 years, male 462.1
GTEX-RVPU-0011-R10A-SM-2XCAH 50-59 years, male 441.6
GTEX-TSE9-0011-R10A-SM-3DB7O 60-69 years, female 439.4
GTEX-NL4W-0011-R10A-SM-2I3DY 50-59 years, male 429.4
GTEX-12WSM-0011-R10a-SM-5DUWV 60-69 years, male 428.0
GTEX-13G51-0011-R10b-SM-5LZYF 60-69 years, male 427.0
GTEX-XLM4-0011-R10A-SM-4AT5P 60-69 years, male 424.5
GTEX-13NYS-0011-R10a-SM-5MR4S 60-69 years, male 418.4
GTEX-13N1W-0011-R10b-SM-5MR4H 70-79 years, male 406.2
GTEX-13NYB-0011-R10a-SM-5KM43 40-49 years, male 402.7
GTEX-12WSH-0011-R10a-SM-5LZUS 50-59 years, male 391.0
GTEX-ZVZQ-0011-R10b-SM-51MRT 60-69 years, female 389.9
GTEX-ZDXO-0011-R10a-SM-4WWD8 60-69 years, male 389.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC 60-69 years, male 387.8
GTEX-12ZZW-0011-R10b-SM-5HL9X 50-59 years, male 377.2
GTEX-12WSA-0011-R10b-SM-5P9ET 60-69 years, male 374.3
GTEX-132Q8-0011-R10b-SM-5DUWZ 60-69 years, male 373.5
GTEX-13IVO-0011-R10a-SM-5LZY3 70-79 years, male 372.7
GTEX-X4EP-0011-R10B-SM-4QASJ 60-69 years, female 360.9
GTEX-ZVT3-0011-R10b-SM-57WB6 60-69 years, female 350.1
GTEX-ZXG5-0011-R10a-SM-57WDD 60-69 years, male 347.2
GTEX-145MG-0011-R10a-SM-5PNWG 50-59 years, male 342.2
GTEX-13QJC-0011-R10a-SM-5SI63 60-69 years, female 332.4
GTEX-13X6K-0011-R10a-SM-5P9JR 60-69 years, female 331.9
GTEX-13O3Q-0011-R10b-SM-5KM39 50-59 years, male 326.4
GTEX-13RTJ-0011-R10b-SM-5O9CW 60-69 years, male 322.9
GTEX-YJ89-0011-R10a-SM-4SOK9 60-69 years, male 314.6
GTEX-13CZV-0011-R10b-SM-5LZYD 60-69 years, male 314.1
GTEX-12WSF-0011-R10a-SM-5LZVH 70-79 years, male 313.6
GTEX-12ZZX-0011-R10b-SM-5DUWK 40-49 years, female 312.2
GTEX-T5JC-0011-R10A-SM-32PM2 20-29 years, male 304.5
GTEX-ZAB4-0011-R10a-SM-4SOKH 40-49 years, male 303.9
GTEX-13X6J-0011-R10b-SM-5PNWA 50-59 years, male 302.7
GTEX-14BIN-0011-R10a-SM-5S2UA 50-59 years, female 297.6
GTEX-ZF28-0011-R10a-SM-4WWEH 60-69 years, male 292.9
GTEX-P44H-0011-R10A-SM-2XCEK 40-49 years, male 291.5
GTEX-13QIC-0011-R10a-SM-5O9C7 60-69 years, female 276.5
GTEX-13S7M-0011-R10b-SM-5PNZB 60-69 years, female 274.5
GTEX-N7MT-0011-R10A-SM-2I3E1 60-69 years, female 271.6
GTEX-131YS-0011-R10b-SM-5EQ5N 60-69 years, female 265.6
GTEX-N7MS-0011-R10A-SM-2HMJK 60-69 years, male 265.0
GTEX-12WSC-0011-R10a-SM-5GU57 50-59 years, male 256.1
GTEX-S7SE-0011-R10A-SM-2XCDF 50-59 years, male 254.4
GTEX-XMD1-0011-R10A-SM-4AT4A 60-69 years, male 253.6
GTEX-OXRN-0011-R10A-SM-2I5GC 50-59 years, male 252.1
GTEX-YFC4-0011-R10a-SM-4SOK5 40-49 years, female 250.1
GTEX-Q2AG-0011-R10A-SM-2HMLA 40-49 years, female 250.0
GTEX-NPJ8-0011-R10A-SM-2YUMO 40-49 years, male 249.1
GTEX-Y8DK-0011-R10A-SM-4SOK1 60-69 years, male 246.4
GTEX-WZTO-0011-R10B-SM-4E3KB 40-49 years, male 238.1
GTEX-131XH-0011-R10a-SM-5EGLJ 50-59 years, male 233.3
GTEX-11ZUS-0011-R10b-SM-5BC79 30-39 years, male 232.0
GTEX-13FLW-0011-R10b-SM-5LZZF 50-59 years, male 231.9
GTEX-NPJ7-0011-R10A-SM-2I3E5 60-69 years, female 231.0
GTEX-145LS-0011-R10a-SM-5PNUQ 60-69 years, female 227.5
GTEX-13X6I-0011-R10a-SM-5PNWI 60-69 years, male 227.4
GTEX-QMR6-0011-R10A-SM-32PKO 50-59 years, male 213.6
GTEX-12WSE-0011-R10b-SM-5P9JV 20-29 years, male 211.6
GTEX-QVUS-0011-R10A-SM-3GIK3 60-69 years, female 206.3
GTEX-ZE7O-0011-R10a-SM-57WAZ 50-59 years, female 198.7
GTEX-WWYW-0011-R10A-SM-3NB35 50-59 years, female 198.4
GTEX-1313W-0011-R10b-SM-5DUXA 50-59 years, female 194.5
GTEX-T6MN-0011-R10A-SM-32QP7 50-59 years, male 189.7
GTEX-Z93S-0011-R10a-SM-4RGNM 50-59 years, male 187.5
GTEX-X4XX-0011-R10B-SM-46MWO 60-69 years, male 185.2
GTEX-WVLH-0011-R10A-SM-3MJFM 50-59 years, male 155.2
GTEX-145MH-0011-R10b-SM-5PNUK 50-59 years, male 150.6
GTEX-QDT8-0011-R10A-SM-32PKG 30-39 years, female 150.5
GTEX-NL3H-0011-R10A-SM-2I3E9 60-69 years, male 132.4
GTEX-QVJO-0011-R10A-SM-2S1QJ 60-69 years, female 108.5
GTEX-X585-0011-R10A-SM-46MUY 50-59 years, male 95.2
GTEX-WL46-0011-R10A-SM-3MJFQ 50-59 years, male 70.7
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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