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PPP1R16B

COLON - Expression summary

RNA expression
HPA:4.7TPM
GTEx:2.0RPKM
FANTOM5:16.6Tags Per Million

COLON - Annotated protein expression

Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM

4.7
overview Male, age 54 Sample 1
TPM: 4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 6.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 2.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 2.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 4.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 8.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 3.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 6.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 4.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 4.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 8.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

2.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.2
Samples: 149

Max RPKM: 6.4
Min RPKM: 0.0
Std RPKM: 0.9
Median RPKM: 1.0
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 6.4
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 4.9
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 4.9
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 4.8
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 4.3
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 4.0
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 3.7
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 3.2
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 2.9
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 2.5
Show all
Colon - Transverse
RPKM: 2.6
Samples: 196

Max RPKM: 15.2
Min RPKM: 0.3
Std RPKM: 1.7
Median RPKM: 2.2
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 15.2
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 10.6
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 8.8
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 7.8
GTEX-12C56-0626-SM-5EGGC 20-29 years, male 7.0
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 6.7
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 6.7
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 6.5
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 6.4
GTEX-YEC3-2426-SM-5IFJR 50-59 years, male 5.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

16.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 16.6
FF:10014-101C5 62,83,84 years, mixed 16.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.