Fields »
ABOUT
HELP
BLOG
ACOT8

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:15.4TPM
GTEx:11.1RPKM
FANTOM5:35.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody CAB010261

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

15.4
overview Male, age 54 Sample 1
TPM: 21.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 21
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 17.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 24.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 10.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 13.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 14.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 12.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 9.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 12.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 15.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 15.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 12.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

11.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 8.6
Samples: 149

Max RPKM: 13.9
Min RPKM: 5.1
Std RPKM: 1.6
Median RPKM: 8.5
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 13.9
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 12.8
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 12.2
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 12.1
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 11.9
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 11.7
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 11.7
GTEX-V955-1726-SM-4JBHF 60-69 years, male 11.5
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 11.2
GTEX-131XE-1026-SM-5EGKE 50-59 years, male 11.1
Show all
Colon - Transverse
RPKM: 13.1
Samples: 196

Max RPKM: 42.5
Min RPKM: 3.3
Std RPKM: 5.1
Median RPKM: 12.3
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 42.5
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 29.1
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 25.2
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 24.5
GTEX-Q734-1126-SM-48TZY 40-49 years, female 23.7
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 23.3
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 23.1
GTEX-QLQW-0426-SM-447A7 30-39 years, male 22.6
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 22.6
GTEX-UPIC-1726-SM-4IHKG 20-29 years, female 22.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

35.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 35.8
FF:10014-101C5 62,83,84 years, mixed 35.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.