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NALCN

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:0.5TPM
GTEx:0.1RPKM
FANTOM5:1.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA031889

  

Antibody HPA031890

  

Antibody HPA031958

  

Endothelial cells

 Low   Not detected   Not detected  

Glandular cells

 Medium   Medium   Medium  

Peripheral nerve/ganglion

 Low   Low   Medium  
     
     
     

COLON - HPA RNA-seq

Average TPM

0.5
overview Male, age 54 Sample 1
TPM: 0.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.1
Samples: 149

Max RPKM: 0.5
Min RPKM: 0.0
Std RPKM: 0.0
Median RPKM: 0.1
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 0.5
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 0.4
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 0.4
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 0.3
GTEX-12696-1926-SM-5EGJT 60-69 years, male 0.3
GTEX-12KS4-2326-SM-5EGJB 30-39 years, male 0.3
GTEX-12WSD-2626-SM-5EGJE 60-69 years, female 0.3
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 0.3
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 0.3
GTEX-13111-1926-SM-5GCOL 50-59 years, male 0.3
Show all
Colon - Transverse
RPKM: 0.1
Samples: 196

Max RPKM: 0.4
Min RPKM: 0.0
Std RPKM: 0.0
Median RPKM: 0.0
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 0.4
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 0.4
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 0.4
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 0.4
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 0.4
GTEX-117YX-0826-SM-5H11J 50-59 years, male 0.3
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 0.3
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 0.3
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 0.3
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 0.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

1.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 1.6
FF:10014-101C5 62,83,84 years, mixed 1.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.