Expression of CORO7-PAM16 in cancer - Summary - The Human Protein Atlas

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CORO7-PAM16

TISSUE

CELL

PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

GENERAL INFORMATION
Gene name	CORO7-PAM16
Gene description	CORO7-PAM16 readthrough
Protein class	Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	1
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):	Not detected
HPA (cell line):	Not detected
HPA (normal tissue):	Not detected

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Estimation of protein expression could not be performed. View primary data.

ANTIBODY IHC RELIABILITY
Data reliability description	RNA-based expert annotation gave inconclusive results. No RNA expression data detected and pending external verification. Caution, targets protein from more than one gene.
Reliability score	Uncertain based on 2 antibodies. HPA041657 , HPA053586
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PROGNOSTIC SUMMARY
Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW
TCGA dataset RNA cancer category: Not detected

PROTEIN EXPRESSION

Colorectal cancer

Prostate cancer

STAINING SUMMARY

HPA041657	HPA053586

GENE INFORMATION
Gene name	CORO7-PAM16
Synonyms
Description	CORO7-PAM16 readthrough (HGNC Symbol)
Entrez gene summary	This locus represents naturally occurring read-through transcription between the neighboring CORO7 (coronin 7) and PAM16 (presequence translocase-associated motor 16) genes on chromosome 16. The read-through transcript encodes a fusion protein that shares sequence identity with each individual gene product. [provided by RefSeq, Jan 2011]
Chromosome	16
Cytoband	p13.3
Chromosome location (bp)	4340251 - 4420494
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000103426 (version 83.38)
Entrez gene	100529144
UniProt
neXtProt
Antibodypedia	CORO7-PAM16 antibodies

PROTEIN BROWSER

CORO7-PAM16-001

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
CORO7-PAM16-001 ENSP00000460885 ENST00000572467	A0A0A6YYL4 [Direct mapping] Coronin Show all	MEMSAT3 predicted membrane proteins Predicted intracellular proteins Show all	GO:0005515 [protein binding] GO:0005794 [Golgi apparatus] Show all	1048 aa 114.2 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.