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DTWD1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:12.4TPM
GTEx:6.5RPKM
FANTOM5:32.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA042214

  

Endothelial cells

 Low  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 

COLON - HPA RNA-seq

Average TPM

12.4
overview Male, age 54 Sample 1
TPM: 11.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 14
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 10.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 11.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 7.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 19.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 11.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 9.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 13.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 12.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 12.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 17.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 10.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

6.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 8.0
Samples: 149

Max RPKM: 11.5
Min RPKM: 4.3
Std RPKM: 1.4
Median RPKM: 8.0
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 11.5
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 11.1
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 10.8
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 10.8
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 10.8
GTEX-WHPG-1626-SM-4M1ZL 50-59 years, male 10.6
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 10.6
GTEX-13QBU-2026-SM-5KLZB 40-49 years, female 10.3
GTEX-145LS-2926-SM-5O99G 60-69 years, female 10.3
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 10.1
Show all
Colon - Transverse
RPKM: 5.4
Samples: 196

Max RPKM: 10.8
Min RPKM: 1.9
Std RPKM: 1.9
Median RPKM: 5.0
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 10.8
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 10.7
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 10.3
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 9.7
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 9.7
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 9.6
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 9.2
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 9.0
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 9.0
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 8.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

32.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 32.0
FF:10014-101C5 62,83,84 years, mixed 32.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.