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TRPA1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:8.0TPM
GTEx:2.1RPKM
FANTOM5:15.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA026630

  

Endothelial cells

 Low  

Glandular cells

 High  

Peripheral nerve/ganglion

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

8.0
overview Male, age 54 Sample 1
TPM: 13.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 7.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 6.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 3.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 8.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 10.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 6.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 8.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 8.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 6.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 10.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

2.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.1
Samples: 149

Max RPKM: 3.5
Min RPKM: 0.0
Std RPKM: 0.4
Median RPKM: 0.0
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 3.5
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 3.3
GTEX-V955-1726-SM-4JBHF 60-69 years, male 1.2
GTEX-XBED-1726-SM-47JYO 60-69 years, male 0.7
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 0.5
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 0.4
GTEX-12696-1926-SM-5EGJT 60-69 years, male 0.4
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 0.4
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 0.4
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 0.3
Show all
Colon - Transverse
RPKM: 3.6
Samples: 196

Max RPKM: 15.3
Min RPKM: 0.0
Std RPKM: 3.0
Median RPKM: 3.5
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 15.3
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 14.5
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 13.7
GTEX-147F3-1926-SM-5SIB9 50-59 years, female 13.5
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 10.1
GTEX-WFON-1426-SM-4LVMT 40-49 years, male 10.0
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 9.5
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 8.9
GTEX-12C56-0626-SM-5EGGC 20-29 years, male 8.8
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 8.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

15.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 15.0
FF:10014-101C5 62,83,84 years, mixed 15.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.