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ESOPHAGUS - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:12.3TPM
GTEx:16.4RPKM
FANTOM5:21.3Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:Low
 

Antibody staining

Antibody HPA001249

  

Antibody CAB004447

  

Squamous epithelial cells

 Not detected   Medium  
   
   

ESOPHAGUS - HPA RNA-seq

Average TPM

12.3
overview Female, age 70 Sample 1
TPM: 11.5
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38 Sample 2
TPM: 11.2
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76 Sample 3
TPM: 14.1
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

16.4

GTEx sample id

Sample description

RPKM
Esophagus - Mucosa
RPKM: 16.4
Samples: 286

Max RPKM: 45.3
Min RPKM: 9.1
Std RPKM: 4.6
Median RPKM: 15.3
GTEX-ZZPT-1426-SM-5N9C5 50-59 years, male 45.3
GTEX-132Q8-1826-SM-5EGIY 60-69 years, male 32.5
GTEX-12ZZW-1726-SM-5DUVD 50-59 years, male 30.4
GTEX-ZVE2-1326-SM-5NQ94 50-59 years, male 30.1
GTEX-11DZ1-2026-SM-5A5KG 50-59 years, male 29.5
GTEX-P78B-1026-SM-3NMC4 40-49 years, female 29.1
GTEX-R45C-1226-SM-48FEE 60-69 years, female 28.6
GTEX-ZF3C-1626-SM-4WWB4 50-59 years, female 27.9
GTEX-12WSA-1426-SM-5EGJU 60-69 years, male 27.5
GTEX-145LS-1826-SM-5LUAZ 60-69 years, female 26.8
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

21.3

FANTOM5 sample id

Sample description

Tags Per Million
Esophagus
Tags Per Million: 21.3
FF:10015-101C6 68,74,75 years, mixed 21.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.