Fields »
ABOUT
HELP
BLOG
ARHGEF10

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:2.3TPM
GTEx:9.2RPKM
FANTOM5:13.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
 

Antibody staining

Antibody HPA024649

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  
 
 
 

COLON - HPA RNA-seq

Average TPM

2.3
overview Male, age 54 Sample 1
TPM: 2.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 2.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 2.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 3.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 2.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 2.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

9.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 12.3
Samples: 149

Max RPKM: 27.5
Min RPKM: 6.4
Std RPKM: 3.5
Median RPKM: 12.1
GTEX-145LS-2926-SM-5O99G 60-69 years, female 27.5
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 21.3
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 20.6
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 20.4
GTEX-14C5O-2626-SM-5RQI5 60-69 years, male 20.0
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 19.8
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 19.1
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 19.0
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 18.6
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 18.6
Show all
Colon - Transverse
RPKM: 6.8
Samples: 196

Max RPKM: 21.5
Min RPKM: 1.5
Std RPKM: 4.4
Median RPKM: 5.3
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 21.5
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 18.0
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 17.7
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 17.5
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 17.1
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 16.8
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 16.6
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 16.4
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 16.2
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 16.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

13.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 13.3
FF:10014-101C5 62,83,84 years, mixed 13.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.