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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:0.5TPM
GTEx:0.4RPKM
FANTOM5:0.6Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Chondrocytes:Not available
Peripheral nerve:Not available
 
 

Antibody staining

Antibody HPA043640

  

Antibody HPA046280

  

Antibody CAB010768

  

Adipocytes

 Not detected   Low   Not detected  

Fibroblasts

 Not detected   Not detected   Not detected  

Chondrocytes

 Medium  

Peripheral nerve

 High   Low  
        
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not available
 
 

Antibody staining

Antibody HPA043640

  

Antibody HPA046280

  

Antibody CAB010768

  

Adipocytes

 Not detected   Low   Low  

Chondrocytes

 Not detected   Low  

Fibroblasts

 Not detected   Medium   Not detected  

Peripheral nerve

 Medium  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

0.5
N/A Female, age 80 Sample 1
TPM: 0.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 0.3
N/A Female, age 57 Sample 3
TPM: 0.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 0.8
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 0.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

0.4

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 0.4
Samples: 350

Max RPKM: 3.0
Min RPKM: 0.0
Std RPKM: 0.4
Median RPKM: 0.3
GTEX-XOTO-0226-SM-4B66H 50-59 years, male 3.0
GTEX-11ONC-2526-SM-5986W 60-69 years, male 2.6
GTEX-XYKS-2726-SM-4E3IC 60-69 years, female 2.4
GTEX-147GR-0426-SM-5S2OL 60-69 years, male 2.1
GTEX-Z9EW-1826-SM-5CVMA 40-49 years, male 2.0
GTEX-ZF29-2226-SM-4WWB9 60-69 years, female 2.0
GTEX-13OVL-0326-SM-5IJCS 50-59 years, male 1.8
GTEX-13OW6-0526-SM-5L3HY 50-59 years, male 1.7
GTEX-Y3I4-2226-SM-4TT7O 50-59 years, male 1.7
GTEX-13112-2726-SM-5DUW5 50-59 years, male 1.6
Show all
Adipose - Visceral (Omentum)
RPKM: 0.5
Samples: 227

Max RPKM: 2.1
Min RPKM: 0.0
Std RPKM: 0.3
Median RPKM: 0.4
GTEX-11P7K-0826-SM-5BC5F 30-39 years, male 2.1
GTEX-12WSI-1526-SM-5GCNM 50-59 years, male 2.0
GTEX-ZPIC-0726-SM-57WFM 40-49 years, female 2.0
GTEX-YFCO-1126-SM-5S2N9 40-49 years, male 1.7
GTEX-WFON-1226-SM-3TW8F 40-49 years, male 1.6
GTEX-ZVZP-1126-SM-5GICU 50-59 years, male 1.6
GTEX-WXYG-0926-SM-3NB2O 50-59 years, female 1.5
GTEX-ZGAY-1326-SM-5S2NS 40-49 years, female 1.5
GTEX-117YX-0726-SM-5GIET 50-59 years, male 1.4
GTEX-132NY-1126-SM-5PNVE 60-69 years, male 1.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

0.6

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 0.6
FF:10010-101C1 65,65,76 years, mixed 0.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.