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RAB3A

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:2.3TPM
GTEx:3.5RPKM
FANTOM5:8.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA003160

  

Antibody CAB009949

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 High   Not detected  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

2.3
overview Male, age 54 Sample 1
TPM: 1.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 2.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 2.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 2.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 2.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 4.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

3.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 4.2
Samples: 149

Max RPKM: 15.1
Min RPKM: 1.2
Std RPKM: 2.0
Median RPKM: 3.8
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 15.1
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 12.3
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 11.5
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 10.7
GTEX-11GS4-1826-SM-5HL4T 60-69 years, male 8.5
GTEX-117XS-2226-SM-5GIE1 60-69 years, male 8.1
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 7.6
GTEX-12ZZY-2726-SM-5EQ45 60-69 years, male 7.3
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 7.1
GTEX-12WSD-2626-SM-5EGJE 60-69 years, female 7.1
Show all
Colon - Transverse
RPKM: 3.0
Samples: 196

Max RPKM: 11.8
Min RPKM: 0.7
Std RPKM: 1.7
Median RPKM: 2.5
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 11.8
GTEX-11GSP-1626-SM-5986N 60-69 years, female 10.4
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 9.7
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 9.0
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 8.3
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 7.4
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 7.0
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 6.9
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 6.8
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 6.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

8.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 8.1
FF:10014-101C5 62,83,84 years, mixed 8.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.