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CPVL

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:37.5TPM
GTEx:4.2RPKM
FANTOM5:30.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
Endothelial cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA045715

  

Antibody HPA056466

  

Antibody CAB003697

  

Glandular cells

 Not detected   Not detected   Not detected  

Endothelial cells

 Not detected   Not detected  

Peripheral nerve/ganglion

 Not detected  
     
     

COLON - HPA RNA-seq

Average TPM

37.5
overview Male, age 54 Sample 1
TPM: 26.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 58.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 29.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 22.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 59.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 35.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 37.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 33
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 53.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 18.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 41.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 35.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 35
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

4.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 3.9
Samples: 149

Max RPKM: 9.6
Min RPKM: 1.2
Std RPKM: 1.7
Median RPKM: 3.6
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 9.6
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 9.4
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 9.4
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 9.2
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 8.9
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 8.2
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 8.1
GTEX-WHPG-1626-SM-4M1ZL 50-59 years, male 7.5
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 7.2
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 7.0
Show all
Colon - Transverse
RPKM: 4.5
Samples: 196

Max RPKM: 25.8
Min RPKM: 0.5
Std RPKM: 2.8
Median RPKM: 3.8
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 25.8
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 13.6
GTEX-117YX-0826-SM-5H11J 50-59 years, male 13.0
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 11.2
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 11.0
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 10.1
GTEX-139YR-2126-SM-5KM11 50-59 years, male 10.0
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 9.7
GTEX-144GM-1226-SM-5LU52 20-29 years, male 9.5
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 9.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

30.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 30.3
FF:10014-101C5 62,83,84 years, mixed 30.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.