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IMPDH1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:12.5TPM
GTEx:17.7RPKM
FANTOM5:12.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA001400

  

Endothelial cells

 Medium  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

12.5
overview Male, age 54 Sample 1
TPM: 13.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 10
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 13.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 6.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 13.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 15.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 8.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 13
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 18.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 11
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 14.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 13.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 10.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

17.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 19.0
Samples: 149

Max RPKM: 49.4
Min RPKM: 8.7
Std RPKM: 6.4
Median RPKM: 18.2
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 49.4
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 38.8
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 34.9
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 33.9
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 32.9
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 32.9
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 31.7
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 30.9
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 29.7
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 29.3
Show all
Colon - Transverse
RPKM: 16.6
Samples: 196

Max RPKM: 54.5
Min RPKM: 5.0
Std RPKM: 6.4
Median RPKM: 15.2
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 54.5
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 45.5
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 39.4
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 35.6
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 34.2
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 30.2
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 30.1
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 28.9
GTEX-ZAB4-2226-SM-5HL97 40-49 years, male 28.9
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 28.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

12.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 12.6
FF:10014-101C5 62,83,84 years, mixed 12.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.