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TSPAN13

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:74.3TPM
GTEx:16.1RPKM
FANTOM5:37.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
 

Antibody staining

Antibody HPA007426

  

Endothelial cells

 Not detected  

Glandular cells

 Low  
 

COLON - HPA RNA-seq

Average TPM

74.3
overview Male, age 54 Sample 1
TPM: 172.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 95.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 76.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 55.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 37.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 42.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 70.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 67.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 50.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 83.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 108.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 53.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 51.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

16.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 4.9
Samples: 149

Max RPKM: 24.6
Min RPKM: 0.8
Std RPKM: 3.3
Median RPKM: 3.9
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 24.6
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 14.2
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 14.2
GTEX-145LS-2926-SM-5O99G 60-69 years, female 14.0
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 13.7
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 13.6
GTEX-XBED-1726-SM-47JYO 60-69 years, male 12.8
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 12.5
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 11.7
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 11.2
Show all
Colon - Transverse
RPKM: 24.6
Samples: 196

Max RPKM: 90.1
Min RPKM: 2.0
Std RPKM: 17.0
Median RPKM: 23.9
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 90.1
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 65.6
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 61.8
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 60.8
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 60.7
GTEX-R55G-1226-SM-48FDC 40-49 years, female 60.6
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 60.5
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 58.8
GTEX-Q734-1126-SM-48TZY 40-49 years, female 57.3
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 56.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

37.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 37.7
FF:10014-101C5 62,83,84 years, mixed 37.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.