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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:25.9TPM
GTEx:16.8RPKM
FANTOM5:28.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
 

Antibody staining

Antibody HPA000162

  

Adipocytes

 Medium  

Fibroblasts

 Medium  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
 

Antibody staining

Antibody HPA000162

  

Adipocytes

 Medium  

Fibroblasts

 Medium  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

25.9
N/A Female, age 80 Sample 1
TPM: 26.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 25.7
N/A Female, age 57 Sample 3
TPM: 22.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 29.1
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 26
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

16.8

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 17.4
Samples: 350

Max RPKM: 27.4
Min RPKM: 8.2
Std RPKM: 3.4
Median RPKM: 17.1
GTEX-13NZ9-0526-SM-5J1OX 50-59 years, male 27.4
GTEX-TSE9-0226-SM-3DB84 60-69 years, female 27.3
GTEX-OXRK-0326-SM-3NB3R 50-59 years, female 26.4
GTEX-U3ZN-2626-SM-3DB7T 30-39 years, female 25.6
GTEX-NFK9-0326-SM-3MJGV 40-49 years, male 25.3
GTEX-S33H-1126-SM-2XCB6 30-39 years, male 25.3
GTEX-SNMC-1326-SM-2XCFK 20-29 years, male 25.2
GTEX-13FHP-0226-SM-5K7WD 50-59 years, male 25.1
GTEX-R55F-1426-SM-2TF53 50-59 years, male 24.9
GTEX-ZEX8-2326-SM-5S2MN 50-59 years, male 24.8
Show all
Adipose - Visceral (Omentum)
RPKM: 15.7
Samples: 227

Max RPKM: 28.7
Min RPKM: 4.7
Std RPKM: 4.8
Median RPKM: 14.8
GTEX-11NV4-1426-SM-5BC4W 60-69 years, male 28.7
GTEX-13OW7-1126-SM-5K7V6 50-59 years, male 27.5
GTEX-11ZTS-1326-SM-5EQMA 60-69 years, female 26.6
GTEX-XOT4-0826-SM-4B66Y 60-69 years, female 26.1
GTEX-113JC-0726-SM-5GZZR 50-59 years, female 25.3
GTEX-YECK-1426-SM-5IFHE 60-69 years, male 24.9
GTEX-13G51-0526-SM-5IJCQ 60-69 years, male 24.7
GTEX-14BIN-1226-SM-5S2OM 50-59 years, female 24.5
GTEX-ZUA1-2126-SM-57YRB 40-49 years, male 24.1
GTEX-11PRG-1526-SM-5HL6Z 50-59 years, male 24.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

28.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 28.8
FF:10010-101C1 65,65,76 years, mixed 28.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.