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SH3GL2
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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:33.7RPKM
FANTOM5:120.9Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Medium
 

Antibody staining

Antibody HPA026685

 

Antibody HPA063573

 

Antibody CAB010056

 

Glial cells

Low   Not detected   Not detected  

Neuronal cells

Low   Low   High  
     
     
     

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

33.7

GTEx sample id

Sample description

RPKM

Brain - Hippocampus
RPKM: 33.7
Samples: 94

Max RPKM: 138.7
Min RPKM: 1.7
Std RPKM: 29.4
Median RPKM: 26.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 138.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 118.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 111.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 102.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 98.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 87.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 82.1
GTEX-RNOR-0011-R1A-SM-5SI8F 50-59 years, female 79.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 79.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 77.6
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 73.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 72.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 66.4
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 64.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 62.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 59.4
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 58.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 57.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 56.8
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 55.6
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 54.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 53.5
GTEX-N7MT-0011-R1a-SM-5SI7S 60-69 years, female 53.3
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 47.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 46.9
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 46.4
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 46.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 45.3
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 38.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 38.3
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 37.7
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 36.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 35.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 35.0
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 34.7
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 34.7
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 34.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 34.4
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 34.0
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 32.6
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 32.0
GTEX-XOTO-0011-R1B-SM-4B65C 50-59 years, male 31.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 31.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 28.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 28.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 26.8
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 26.7
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 26.1
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 25.7
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 23.6
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 21.5
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 20.9
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 19.9
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 19.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 19.7
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 19.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 18.0
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 17.7
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 16.7
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 16.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 16.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 16.3
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 15.5
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 15.2
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 14.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 14.2
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 13.6
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 10.9
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 10.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 10.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 9.9
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 9.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 9.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 8.3
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 7.6
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 7.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 7.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 7.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 6.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 6.6
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 5.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 5.5
GTEX-12WSB-0011-R1b-SM-5P9EY 60-69 years, female 5.4
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 4.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 4.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 4.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 3.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 3.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 3.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 3.0
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 2.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 2.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 2.2
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 1.7
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

120.9

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 103.7
FF:10169-103B7 60 years, female 129.6
FF:10153-102I9 76 years, female 77.7

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