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DDX50

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:16.2TPM
GTEx:15.9RPKM
FANTOM5:62.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Low
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA037388

  

Antibody HPA058196

  

Endothelial cells

 Not detected   Medium  

Glandular cells

 Low   Low  

Peripheral nerve/ganglion

 Not detected   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

16.2
overview Male, age 54 Sample 1
TPM: 14.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 13.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 10.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 15.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 12.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 24.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 19
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 13.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 18.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 17.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 18.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 19
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 12.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

15.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 18.9
Samples: 149

Max RPKM: 28.6
Min RPKM: 11.1
Std RPKM: 2.9
Median RPKM: 18.7
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 28.6
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 26.8
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 26.4
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 25.8
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 25.3
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 24.4
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 24.1
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 24.1
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 23.7
GTEX-139T6-1426-SM-5P9J7 50-59 years, male 23.5
Show all
Colon - Transverse
RPKM: 13.7
Samples: 196

Max RPKM: 26.2
Min RPKM: 4.5
Std RPKM: 4.6
Median RPKM: 12.7
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 26.2
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 24.7
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 24.5
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 24.5
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 24.0
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 23.8
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 23.7
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 23.6
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 23.4
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 22.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

62.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 62.7
FF:10014-101C5 62,83,84 years, mixed 62.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.