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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:824.9TPM
GTEx:377.5RPKM
FANTOM5:270.2Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Not detected
Myoepithelial cells:High
 

Antibody staining

Antibody HPA041264

 

Antibody HPA041271

 

Antibody CAB000002

 

Antibody CAB013531

 

Adipocytes

High   Not detected   Not detected   Not detected  

Glandular cells

High   Low   Not detected   Not detected  

Myoepithelial cells

High   High   High   High  
       
       
       

BREAST - HPA RNA-seq

Average TPM

824.9

overview Female, age 52 Sample 1
TPM: 593.6
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80 Sample 2
TPM: 863.2
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47 Sample 3
TPM: 699.9
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38 Sample 4
TPM: 1143
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

377.5

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 377.5
Samples: 214

Max RPKM: 1102.5
Min RPKM: 27.6
Std RPKM: 235.3
Median RPKM: 338.6
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 1102.5
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 1088.2
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 1056.8
GTEX-QVJO-1826-SM-447C9 60-69 years, female 931.8
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 922.9
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 918.2
GTEX-ZF3C-2326-SM-5S2MZ 50-59 years, female 873.6
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 873.4
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 871.8
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 835.2
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 828.6
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 824.0
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 792.4
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 777.8
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 771.9
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 769.5
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 736.5
GTEX-TML8-1226-SM-32QON 40-49 years, female 728.8
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 725.2
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 724.7
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 715.9
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 715.3
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 713.0
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 706.9
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 699.2
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 698.0
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 689.8
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 688.6
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 686.6
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 684.0
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 665.0
GTEX-RU72-0626-SM-46MUI 50-59 years, female 660.6
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 660.5
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 657.5
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 644.0
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 638.2
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 637.7
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 630.2
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 628.2
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 613.2
GTEX-14753-2426-SM-5LU8U 60-69 years, male 604.6
GTEX-13113-1726-SM-5GCOO 60-69 years, female 593.2
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 575.9
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 565.2
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 553.2
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 552.2
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 529.8
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 528.8
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 528.1
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 527.8
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 522.9
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 521.9
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 518.1
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 515.4
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 511.4
GTEX-ZLV1-1426-SM-4WWES 60-69 years, female 509.8
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 501.7
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 499.6
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 499.4
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 497.6
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 497.5
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 497.4
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 494.0
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 487.0
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 479.2
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 471.5
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 464.6
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 464.0
GTEX-R55F-1726-SM-2TF4R 50-59 years, male 460.2
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 457.5
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 452.7
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 449.4
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 444.8
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 441.4
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 439.9
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 435.4
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 431.0
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 426.8
GTEX-11EI6-0626-SM-5985T 60-69 years, male 422.3
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 420.5
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 409.5
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 408.9
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 407.2
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 406.9
GTEX-XUJ4-1926-SM-4BOOV 60-69 years, female 405.9
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 402.4
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 399.9
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 399.1
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 397.4
GTEX-ZYWO-2326-SM-5GZY4 40-49 years, female 397.4
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 395.3
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 393.0
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 383.4
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 369.5
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 368.4
GTEX-XBED-1626-SM-47JYN 60-69 years, male 365.3
GTEX-12WSB-0626-SM-59HJO 60-69 years, female 364.8
GTEX-1122O-1226-SM-5H113 60-69 years, female 364.0
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 362.2
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 361.6
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 358.3
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 354.8
GTEX-T6MN-0726-SM-32PML 50-59 years, male 353.3
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 350.5
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 340.7
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 340.6
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 340.1
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 337.0
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 334.8
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 333.0
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 330.8
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 329.7
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 324.3
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 323.1
GTEX-11OF3-1926-SM-59889 60-69 years, male 310.8
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 310.5
GTEX-11P81-1926-SM-5BC53 30-39 years, female 307.3
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 305.5
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 304.6
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 301.7
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 295.4
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 293.7
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 292.6
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 291.8
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 290.0
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 283.3
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 283.0
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 282.7
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 282.6
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 275.8
GTEX-SIU7-1626-SM-4BRUK 50-59 years, male 272.7
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 271.0
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 268.5
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 265.4
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 264.8
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 262.4
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 262.1
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 247.5
GTEX-R53T-1526-SM-48FEK 50-59 years, female 241.5
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 240.5
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 240.5
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 238.8
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 236.2
GTEX-111YS-1926-SM-5GICC 60-69 years, male 233.7
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 232.4
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 228.2
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 226.2
GTEX-117YX-1426-SM-5H12H 50-59 years, male 224.3
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 223.1
GTEX-QEL4-2126-SM-447AE 50-59 years, male 214.4
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 213.0
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 209.8
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 209.3
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 206.0
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 203.0
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 200.2
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 188.4
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 186.5
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 184.1
GTEX-ZDTT-2126-SM-5S2OJ 60-69 years, male 181.8
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 180.6
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 179.7
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 178.6
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 176.3
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 173.8
GTEX-S341-1526-SM-4AD6K 40-49 years, female 173.1
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 170.3
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 164.5
GTEX-QEG5-0726-SM-4R1JQ 20-29 years, male 161.4
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 160.4
GTEX-R55D-0826-SM-48FEA 50-59 years, male 158.3
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 156.0
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 151.1
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 150.5
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 150.4
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 147.7
GTEX-11P82-1326-SM-5HL62 20-29 years, male 146.5
GTEX-1192X-2326-SM-5987X 50-59 years, male 143.8
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 142.2
GTEX-X261-0626-SM-3NMD9 50-59 years, male 141.9
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 141.5
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 140.6
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 135.4
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 126.3
GTEX-REY6-2426-SM-48FF5 60-69 years, male 123.0
GTEX-117XS-1926-SM-5GICO 60-69 years, male 121.2
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 120.4
GTEX-WFON-1826-SM-3GILG 40-49 years, male 117.2
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 113.0
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 108.4
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 107.0
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 104.2
GTEX-QMRM-1626-SM-4R1KV 50-59 years, male 103.4
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 99.2
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 98.7
GTEX-ZLFU-2126-SM-4WWEV 40-49 years, male 98.0
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 97.4
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 91.3
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 91.0
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 85.6
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 84.5
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 80.7
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 79.8
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 79.6
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 77.7
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 64.7
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 64.7
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 61.2
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 58.0
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 56.9
GTEX-144GM-0926-SM-5O994 20-29 years, male 53.7
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 42.7
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 37.9
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 27.6
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

270.2

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 270.2
FF:10080-102A8 77 years, female 270.2

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