We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
RPL28
  • TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:867.2TPM
GTEx:80.7RPKM
FANTOM5:1682.4Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA050459

 

Glandular cells

High  
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

867.2

overview Male, age 65 Sample 1
TPM: 969.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 824.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 921.9
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 753.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

80.7

GTEx sample id

Sample description

RPKM

Small Intestine - Terminal Ileum
RPKM: 80.7
Samples: 88

Max RPKM: 174.1
Min RPKM: 36.0
Std RPKM: 28.5
Median RPKM: 72.4
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 174.1
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 142.1
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 137.1
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 132.8
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 131.9
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 131.6
GTEX-13O61-1326-SM-5KM31 60-69 years, male 131.4
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 129.7
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 128.9
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 126.5
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 123.3
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 117.6
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 115.8
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 109.9
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 109.2
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 109.0
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 108.0
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 106.0
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 105.5
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 104.3
GTEX-1192X-2526-SM-59868 50-59 years, male 102.4
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 102.2
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 101.9
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 99.6
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 98.3
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 95.8
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 93.5
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 91.4
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 90.3
GTEX-ZYWO-1526-SM-5SIAL 40-49 years, female 90.2
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 88.3
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 85.4
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 82.2
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 79.9
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 79.1
GTEX-13113-1226-SM-5EGHT 60-69 years, female 78.6
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 76.5
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 75.7
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 75.5
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 75.4
GTEX-13111-1426-SM-5DUW3 50-59 years, male 75.2
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 74.4
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 73.9
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 73.2
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 71.5
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 70.3
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 70.2
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 70.1
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 69.6
GTEX-117YX-0326-SM-5GICL 50-59 years, male 69.3
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 69.1
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 68.1
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 67.9
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 67.6
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 67.2
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 66.5
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 66.3
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 66.0
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 65.8
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 64.8
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 63.1
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 63.0
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 61.6
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 61.2
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 59.9
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 59.8
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 59.6
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 59.3
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 58.9
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 58.8
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 58.7
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 57.6
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 57.3
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 55.6
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 53.9
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 53.0
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 52.9
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 51.3
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 51.1
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 50.5
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 47.6
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 45.5
GTEX-1122O-1326-SM-5H11F 60-69 years, female 44.1
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 43.3
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 40.6
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 37.6
GTEX-111YS-1426-SM-5GID8 60-69 years, male 36.6
GTEX-ZTSS-0926-SM-59865 40-49 years, male 36.0
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

1682.4

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 1682.4
FF:10024-101D6 15,40,85 years, mixed 1682.4

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.