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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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RGS9
  • TISSUE

  • CELL

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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

RGS9

Gene description

Regulator of G-protein signaling 9

Protein class

Disease related genes
Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

3
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Mixed
HPA (cell line):Group enriched (HDLM-2, HEL)
HPA (normal tissue):Mixed

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in photoreceptors in retina.

ANTIBODY IHC RELIABILITY

Data reliability
description

No internal RNA expression data available for correlation. External characterization data supports antibody staining but no internal RNA data available for correlation.

Reliability score

Supported based on 1 antibody.
HPA014137
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PROGNOSTIC SUMMARY

Prognostic marker in pancreatic cancer (favourable).
Pancreatic cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Mixed

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA014137

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Cancer tissues were negative.

GENE INFORMATION

Gene name

RGS9 (HGNC Symbol)

Synonyms

MGC111763, MGC26458, PERRS, RGS9L

Description

Regulator of G-protein signaling 9 (HGNC Symbol)

Entrez gene summary

This gene encodes a member of the RGS family of GTPase activating proteins that function in various signaling pathways by accelerating the deactivation of G proteins. This protein is anchored to photoreceptor membranes in retinal cells and deactivates G proteins in the rod and cone phototransduction cascades. Mutations in this gene result in bradyopsia. Multiple transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, Sep 2009]

Chromosome

17

Cytoband

q24.1

Chromosome location (bp)

65137431 - 65227703

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000108370 (version 83.38)

Entrez gene

8787

UniProt

O75916 (UniProt - Evidence at protein level)

neXtProt

NX_O75916

Antibodypedia

RGS9 antibodies

PROTEIN BROWSER

RGS9-002
RGS9-003
RGS9-007

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

RGS9-002
ENSP00000396329
ENST00000449996
O75916 [Direct mapping]
Regulator of G-protein signaling 9
Show all
Predicted intracellular proteins
Plasma proteins
Disease related genes
Protein evidence (Kim et al 2014)
Show all
GO:0004871 [signal transducer activity]
GO:0005737 [cytoplasm]
GO:0005834 [heterotrimeric G-protein complex]
GO:0005886 [plasma membrane]
GO:0007186 [G-protein coupled receptor signaling pathway]
GO:0007601 [visual perception]
GO:0007603 [phototransduction, visible light]
GO:0008277 [regulation of G-protein coupled receptor protein signaling pathway]
GO:0009968 [negative regulation of signal transduction]
GO:0016056 [rhodopsin mediated signaling pathway]
GO:0022400 [regulation of rhodopsin mediated signaling pathway]
GO:0035556 [intracellular signal transduction]
Show all
671 aa
76.6 kDa
No 0
RGS9-003
ENSP00000262406
ENST00000262406
O75916 [Direct mapping]
Regulator of G-protein signaling 9
Show all
Predicted intracellular proteins
Plasma proteins
Disease related genes
Protein evidence (Kim et al 2014)
Show all
GO:0001750 [photoreceptor outer segment]
GO:0001917 [photoreceptor inner segment]
GO:0004871 [signal transducer activity]
GO:0005096 [GTPase activator activity]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005834 [heterotrimeric G-protein complex]
GO:0005886 [plasma membrane]
GO:0007186 [G-protein coupled receptor signaling pathway]
GO:0007212 [dopamine receptor signaling pathway]
GO:0007399 [nervous system development]
GO:0007601 [visual perception]
GO:0007603 [phototransduction, visible light]
GO:0008277 [regulation of G-protein coupled receptor protein signaling pathway]
GO:0009968 [negative regulation of signal transduction]
GO:0016056 [rhodopsin mediated signaling pathway]
GO:0022400 [regulation of rhodopsin mediated signaling pathway]
GO:0032403 [protein complex binding]
GO:0035556 [intracellular signal transduction]
GO:0043547 [positive regulation of GTPase activity]
GO:0043627 [response to estrogen]
Show all
674 aa
77 kDa
No 0
RGS9-007
ENSP00000405814
ENST00000443584
E9PD91 [Direct mapping]
Regulator of G-protein-signaling 9
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Show all
GO:0004871 [signal transducer activity]
GO:0005737 [cytoplasm]
GO:0005834 [heterotrimeric G-protein complex]
GO:0005886 [plasma membrane]
GO:0007186 [G-protein coupled receptor signaling pathway]
GO:0035556 [intracellular signal transduction]
Show all
628 aa
72 kDa
No 0

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