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ABCC3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:14.2TPM
GTEx:23.5RPKM
FANTOM5:89.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA048483

  

Antibody CAB037136

  

Endothelial cells

 Low   Low  

Glandular cells

 High   Medium  

Peripheral nerve/ganglion

 Low   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

14.2
overview Male, age 54 Sample 1
TPM: 10.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 15.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 19.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 13.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 6.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 10.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 9.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 12.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 14
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 19.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 15.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 20.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 17.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

23.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.3
Samples: 149

Max RPKM: 20.0
Min RPKM: 0.0
Std RPKM: 2.5
Median RPKM: 0.5
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 20.0
GTEX-V955-1726-SM-4JBHF 60-69 years, male 16.2
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 12.1
GTEX-XBED-1726-SM-47JYO 60-69 years, male 9.3
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 7.2
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 6.0
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 5.5
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 5.3
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 4.7
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 3.7
Show all
Colon - Transverse
RPKM: 40.3
Samples: 196

Max RPKM: 105.0
Min RPKM: 0.1
Std RPKM: 30.4
Median RPKM: 47.5
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 105.0
GTEX-PLZ5-1126-SM-3P613 50-59 years, male 102.3
GTEX-R55D-1826-SM-48FEF 50-59 years, male 97.1
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 97.1
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 96.8
GTEX-13QBU-1826-SM-5IJG3 40-49 years, female 93.5
GTEX-XQ8I-2126-SM-4BOOM 50-59 years, male 86.5
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 86.1
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 85.9
GTEX-PWCY-1026-SM-48TD4 20-29 years, female 84.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

89.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 89.4
FF:10014-101C5 62,83,84 years, mixed 89.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.