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NFKB1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:23.3TPM
GTEx:10.5RPKM
FANTOM5:44.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 
 

Antibody staining

Antibody HPA027305

  

Antibody CAB004031

  

Endothelial cells

 Low   Low  

Glandular cells

 Medium   Medium  

Peripheral nerve/ganglion

 Not detected  
      
   
   
   

COLON - HPA RNA-seq

Average TPM

23.3
overview Male, age 54 Sample 1
TPM: 22.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 22.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 24.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 25.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 18.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 23.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 27.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 22.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 22.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 25.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 27.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 23.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 16.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

10.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.7
Samples: 149

Max RPKM: 16.8
Min RPKM: 5.4
Std RPKM: 1.9
Median RPKM: 9.7
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 16.8
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 15.0
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 14.5
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 13.5
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 13.4
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 13.1
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 12.9
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 12.7
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 12.5
GTEX-WHWD-1526-SM-4OORV 50-59 years, male 12.2
Show all
Colon - Transverse
RPKM: 11.1
Samples: 196

Max RPKM: 19.7
Min RPKM: 6.2
Std RPKM: 1.9
Median RPKM: 10.9
GTEX-144GM-1226-SM-5LU52 20-29 years, male 19.7
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 19.2
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 17.8
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 17.1
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 16.3
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 15.7
GTEX-139YR-2126-SM-5KM11 50-59 years, male 15.7
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 15.7
GTEX-144GN-1126-SM-5LU33 50-59 years, male 15.1
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 14.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

44.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 44.6
FF:10014-101C5 62,83,84 years, mixed 44.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.