Tissue expression of CCDC86 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	15.4	TPM
GTEx:	4.6	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Not detected
Glial cells:	Medium
Neuronal cells:	Medium
Neuropil:	Not detected

Antibody staining	Antibody HPA041117	Antibody HPA041540
Endothelial cells	Not detected	Not detected
Glial cells	Low	Medium
Neuronal cells	Medium	Medium
Neuropil	Not detected	Not detected

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	15.4

Male, age 5

Sample 1
TPM: 11.5

Female, age 40

Sample 2
TPM: 13.9

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 20.9

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	4.6

GTEx sample id

Sample description

RPKM

Brain - Cortex
RPKM: 4.9

Samples: 114

Max RPKM: 11.2
Min RPKM: 2.4
Std RPKM: 1.4
Median RPKM: 4.7

GTEX-11OC5-0726-SM-5P9JK

60-69 years, male

11.2

GTEX-X585-3026-SM-46MWF

50-59 years, male

9.9

GTEX-NPJ8-1526-SM-2D7VU

40-49 years, male

9.1

GTEX-13NYS-3126-SM-5KLYV

60-69 years, male

8.2

GTEX-WHSE-3026-SM-3P5ZH

20-29 years, male

7.4

GTEX-ZZPT-3026-SM-5GZXH

50-59 years, male

7.4

GTEX-WWYW-3126-SM-3NB39

50-59 years, female

7.2

GTEX-144FL-3026-SM-5O99C

50-59 years, male

7.0

GTEX-X4XX-3026-SM-3NMB2

60-69 years, male

6.9

GTEX-11WQK-3026-SM-5EQL6

50-59 years, male

6.8

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Brain - Frontal Cortex (BA9)
RPKM: 4.4

Samples: 108

Max RPKM: 15.6
Min RPKM: 1.3
Std RPKM: 1.6
Median RPKM: 4.2

GTEX-13N2G-0011-R10a-SM-5MR34

60-69 years, male

15.6

GTEX-X4EP-0011-R10B-SM-4QASJ

60-69 years, female

9.5

GTEX-X4XX-0011-R10B-SM-46MWO

60-69 years, male

7.7

GTEX-NPJ8-0011-R10A-SM-2YUMO

40-49 years, male

7.1

GTEX-13NYS-0011-R10a-SM-5MR4S

60-69 years, male

7.0

GTEX-WWYW-0011-R10A-SM-3NB35

50-59 years, female

6.7

GTEX-X585-0011-R10A-SM-46MUY

50-59 years, male

6.3

GTEX-13N1W-0011-R10b-SM-5MR4H

70-79 years, male

6.1

GTEX-12ZZX-0011-R10b-SM-5DUWK

40-49 years, female

6.0

GTEX-13QJC-0011-R10a-SM-5SI63

60-69 years, female

5.9

Show all

CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue