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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:7.1TPM
GTEx:11.6RPKM
FANTOM5:10.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Low
Fibroblasts:Medium
 
 

Antibody staining

Antibody HPA018873

  

Antibody HPA021654

  

Adipocytes

 Not detected   Low  

Chondrocytes

 Low  

Fibroblasts

 Medium   Medium  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Low
 
 

Antibody staining

Antibody HPA018873

  

Antibody HPA021654

  

Adipocytes

 Medium   Low  

Fibroblasts

 Not detected   Medium  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

7.1
N/A Female, age 80 Sample 1
TPM: 11.3
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 6.8
N/A Female, age 57 Sample 3
TPM: 6.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 5.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 5.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

11.6

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 12.8
Samples: 350

Max RPKM: 31.5
Min RPKM: 1.5
Std RPKM: 5.2
Median RPKM: 12.1
GTEX-S7SE-0226-SM-2XCD4 50-59 years, male 31.5
GTEX-12ZZY-0326-SM-5LZVQ 60-69 years, male 30.8
GTEX-XMK1-2226-SM-4B673 40-49 years, male 30.2
GTEX-N7MS-0326-SM-4E3K2 60-69 years, male 29.1
GTEX-YEC3-1226-SM-5IFI8 50-59 years, male 27.9
GTEX-Z93S-0226-SM-5HL7R 50-59 years, male 25.8
GTEX-Y8E4-0726-SM-4WWFN 40-49 years, male 25.7
GTEX-Z93T-0226-SM-5HL5Z 50-59 years, male 25.1
GTEX-11ZUS-0726-SM-59886 30-39 years, male 25.0
GTEX-Y5V5-2426-SM-5IFJA 60-69 years, female 24.8
Show all
Adipose - Visceral (Omentum)
RPKM: 9.7
Samples: 227

Max RPKM: 35.4
Min RPKM: 0.8
Std RPKM: 5.5
Median RPKM: 8.4
GTEX-XUZC-1126-SM-4BOPZ 30-39 years, female 35.4
GTEX-11GS4-1026-SM-5N9DE 60-69 years, male 29.7
GTEX-ZDXO-2326-SM-5LU9W 60-69 years, male 26.5
GTEX-11NUK-2026-SM-5PNVZ 50-59 years, male 25.8
GTEX-XMK1-0926-SM-4B66X 40-49 years, male 23.8
GTEX-Y8E4-1226-SM-5IFIM 40-49 years, male 23.8
GTEX-12WSA-1626-SM-5EGJV 60-69 years, male 21.6
GTEX-14A6H-1026-SM-5SIAZ 30-39 years, male 21.5
GTEX-131YS-1726-SM-5HL7G 60-69 years, female 20.6
GTEX-117YW-0826-SM-5H11O 50-59 years, male 20.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

10.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 10.8
FF:10010-101C1 65,65,76 years, mixed 10.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.