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NAA40

COLON - Expression summary

RNA expression
HPA:4.6TPM
GTEx:7.2RPKM
FANTOM5:15.3Tags Per Million

COLON - Annotated protein expression
 

Antibody staining

Antibody HPA037816

  

Endothelial cells

 Not detected  

Glandular cells

 High  

Peripheral nerve/ganglion

 Low  
 
 
 

COLON - HPA RNA-seq

Average TPM

4.6
overview Male, age 54 Sample 1
TPM: 4.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 4.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 3.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 4.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 5.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 4.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 4.5
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 5.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 5.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 4.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

7.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 5.3
Samples: 149

Max RPKM: 10.7
Min RPKM: 1.9
Std RPKM: 1.7
Median RPKM: 5.1
GTEX-V955-1726-SM-4JBHF 60-69 years, male 10.7
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 10.3
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 10.0
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 8.9
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 8.4
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 8.4
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 8.2
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 8.1
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 8.0
GTEX-1212Z-1826-SM-5FQSH 60-69 years, male 7.8
Show all
Colon - Transverse
RPKM: 8.7
Samples: 196

Max RPKM: 18.1
Min RPKM: 1.8
Std RPKM: 3.2
Median RPKM: 8.9
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 18.1
GTEX-UPIC-1726-SM-4IHKG 20-29 years, female 16.3
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 15.8
GTEX-XYKS-2226-SM-4E3IU 60-69 years, female 15.6
GTEX-S4P3-1226-SM-4AD4Y 50-59 years, female 15.4
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 14.9
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 14.7
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 14.6
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 14.6
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 14.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

15.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 15.3
FF:10014-101C5 62,83,84 years, mixed 15.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.