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NAA25

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:4.4TPM
GTEx:5.3RPKM
FANTOM5:20.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
 

Antibody staining

Antibody HPA039322

  

Endothelial cells

 Low  

Glandular cells

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

4.4
overview Male, age 54 Sample 1
TPM: 3.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 7.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 4.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 2.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 5.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 4.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 4.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 4.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 4.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 4.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

5.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 6.3
Samples: 149

Max RPKM: 14.9
Min RPKM: 2.6
Std RPKM: 1.8
Median RPKM: 6.0
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 14.9
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 13.8
GTEX-14A5H-1626-SM-5SIAN 60-69 years, male 13.3
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 12.7
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 10.7
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 10.6
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 10.6
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 9.7
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 9.3
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 9.1
Show all
Colon - Transverse
RPKM: 4.6
Samples: 196

Max RPKM: 12.8
Min RPKM: 1.3
Std RPKM: 1.4
Median RPKM: 4.3
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 12.8
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 8.9
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 8.6
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 8.4
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 8.1
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 8.1
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 7.4
GTEX-Y114-1526-SM-4TT79 50-59 years, female 7.4
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 7.3
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 7.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

20.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 20.4
FF:10014-101C5 62,83,84 years, mixed 20.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.