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RAB5B

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:73.9TPM
GTEx:59.2RPKM
FANTOM5:113.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody CAB010224

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

73.9
overview Male, age 54 Sample 1
TPM: 70.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 61.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 59.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 48
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 41.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 88.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 100.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 64.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 92.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 81.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 108.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 82.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 60.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

59.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 63.3
Samples: 149

Max RPKM: 79.9
Min RPKM: 34.4
Std RPKM: 8.2
Median RPKM: 63.6
GTEX-1399R-2126-SM-5K7WZ 30-39 years, male 79.9
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 78.8
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 78.7
GTEX-13PVR-1726-SM-5Q5EC 60-69 years, female 77.6
GTEX-13G51-2126-SM-5IJD9 60-69 years, male 76.8
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 76.5
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 76.3
GTEX-145MO-2626-SM-5QGPD 60-69 years, male 74.8
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 74.8
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 74.7
Show all
Colon - Transverse
RPKM: 56.1
Samples: 196

Max RPKM: 80.2
Min RPKM: 23.8
Std RPKM: 8.3
Median RPKM: 54.7
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 80.2
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 78.4
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 76.3
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 75.6
GTEX-S3XE-1126-SM-4AD4N 50-59 years, male 74.6
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 73.4
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 73.2
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 72.2
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 71.6
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 71.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

113.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 113.1
FF:10014-101C5 62,83,84 years, mixed 113.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.