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CPSF6

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:24.0TPM
GTEx:13.4RPKM
FANTOM5:67.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:High
 

Antibody staining

Antibody HPA039973

  

Endothelial cells

 High  

Glandular cells

 High  
 
 

COLON - HPA RNA-seq

Average TPM

24.0
overview Male, age 54 Sample 1
TPM: 27.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 22
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 24
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 23
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 18.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 21
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 26.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 26.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 25
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 30.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 25.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 23.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 19.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

13.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 13.6
Samples: 149

Max RPKM: 25.4
Min RPKM: 6.4
Std RPKM: 3.5
Median RPKM: 13.2
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 25.4
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 23.4
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 22.2
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 22.0
GTEX-13U4I-2626-SM-5SI9C 40-49 years, female 21.6
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 20.7
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 20.3
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 19.4
GTEX-145LS-2926-SM-5O99G 60-69 years, female 19.4
GTEX-12KS4-2326-SM-5EGJB 30-39 years, male 19.0
Show all
Colon - Transverse
RPKM: 13.3
Samples: 196

Max RPKM: 22.2
Min RPKM: 7.3
Std RPKM: 2.7
Median RPKM: 13.1
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 22.2
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 21.8
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 21.8
GTEX-12KS4-2426-SM-5LU8P 30-39 years, male 20.6
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 20.3
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 20.1
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 19.4
GTEX-1128S-1626-SM-5H12O 60-69 years, female 19.3
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 19.2
GTEX-QEL4-1926-SM-4R1JI 50-59 years, male 19.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

67.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 67.5
FF:10014-101C5 62,83,84 years, mixed 67.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.