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TPI1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:460.1TPM
GTEx:73.8RPKM
FANTOM5:36.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Low
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA050924

  

Antibody HPA053568

  

Endothelial cells

 Medium   Low  

Glandular cells

 Low   Medium  

Peripheral nerve/ganglion

 Medium   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

460.1
overview Male, age 54 Sample 1
TPM: 318.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 319.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 343.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 405.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 217.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 540
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 685.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 477.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 482.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 673.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 646
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 516.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 353.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

73.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 58.0
Samples: 149

Max RPKM: 117.4
Min RPKM: 25.3
Std RPKM: 15.4
Median RPKM: 57.1
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 117.4
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 113.5
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 111.0
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 97.0
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 93.4
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 86.7
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 86.2
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 85.1
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 85.0
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 79.7
Show all
Colon - Transverse
RPKM: 85.7
Samples: 196

Max RPKM: 230.2
Min RPKM: 34.4
Std RPKM: 27.9
Median RPKM: 83.7
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 230.2
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 155.9
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 148.2
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 144.6
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 141.4
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 139.4
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 136.5
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 133.7
GTEX-R55G-1226-SM-48FDC 40-49 years, female 131.6
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 130.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

36.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 36.5
FF:10014-101C5 62,83,84 years, mixed 36.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.