Tissue expression of NEDD9 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	53.3	TPM
GTEx:	29.5	RPKM
FANTOM5:	291.1	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	High
Fibroblasts:	High
Peripheral nerve:	High

Antibody staining	Antibody HPA038768	Antibody CAB009720
Adipocytes	Not detected	High
Fibroblasts	Not detected	High
Peripheral nerve	Not detected	High

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	High
Fibroblasts:	High
Peripheral nerve:	Medium

Antibody staining	Antibody HPA038768	Antibody CAB009720
Adipocytes	Not detected	High
Fibroblasts	Not detected	High
Peripheral nerve	Not detected	Medium

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	53.3

Female, age 80

Sample 1
TPM: 41.1

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 45.7

Female, age 57

Sample 3
TPM: 37.5

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 42.5

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 99.6

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	29.5

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 34.2

Samples: 350

Max RPKM: 99.3
Min RPKM: 5.0
Std RPKM: 16.2
Median RPKM: 30.5

GTEX-ZF28-0226-SM-5S2OE

60-69 years, male

99.3

GTEX-PSDG-0326-SM-48TCP

50-59 years, male

96.9

GTEX-145MO-0426-SM-5QGP6

60-69 years, male

96.3

GTEX-QEL4-0326-SM-3GAE5

50-59 years, male

86.4

GTEX-U412-0526-SM-3DB9I

60-69 years, male

86.3

GTEX-13X6K-0226-SM-5QGPB

60-69 years, female

85.2

GTEX-ZE7O-0226-SM-5S2N1

50-59 years, female

77.7

GTEX-139D8-0326-SM-5IJCJ

30-39 years, female

75.7

GTEX-NL3G-0226-SM-4RGLU

60-69 years, female

74.5

GTEX-P44H-0326-SM-2XCES

40-49 years, male

73.9

Show all

Adipose - Visceral (Omentum)
RPKM: 22.2

Samples: 227

Max RPKM: 66.0
Min RPKM: 4.1
Std RPKM: 10.5
Median RPKM: 21.7

GTEX-113JC-0726-SM-5GZZR

50-59 years, female

66.0

GTEX-13OW8-0326-SM-5L3FB

60-69 years, male

58.9

GTEX-11GS4-1026-SM-5N9DE

60-69 years, male

55.8

GTEX-14BIL-2426-SM-5QGQR

50-59 years, male

52.7

GTEX-1192X-1526-SM-5H11I

50-59 years, male

52.5

GTEX-13JUV-0626-SM-5J1MQ

40-49 years, female

49.2

GTEX-ZE7O-1526-SM-5J1NH

50-59 years, female

48.7

GTEX-13OVJ-0926-SM-5K7U1

50-59 years, female

43.5

GTEX-145MI-0826-SM-5SI95

60-69 years, female

41.7

GTEX-13X6K-0726-SM-5LU2Z

60-69 years, female

41.6

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	291.1

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 291.1

FF:10010-101C1

65,65,76 years, mixed

291.1