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HDDC2

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:48.2TPM
GTEx:14.7RPKM
FANTOM5:12.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Medium
Fibroblasts:Not detected
Peripheral nerve:Low
 

Antibody staining

Antibody HPA035677

  

Adipocytes

 Low  

Chondrocytes

 Medium  

Fibroblasts

 Not detected  

Peripheral nerve

 Low  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA035677

  

Adipocytes

 Not detected  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Not detected  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

48.2
N/A Female, age 80 Sample 1
TPM: 55.8
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 52.7
N/A Female, age 57 Sample 3
TPM: 46.8
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 48.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 37.2
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

14.7

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 13.9
Samples: 350

Max RPKM: 28.4
Min RPKM: 7.2
Std RPKM: 2.6
Median RPKM: 13.8
GTEX-Y5V6-2526-SM-5IFJV 60-69 years, male 28.4
GTEX-13FHP-0226-SM-5K7WD 50-59 years, male 21.7
GTEX-OIZI-0226-SM-2XCEE 40-49 years, male 20.6
GTEX-SUCS-1826-SM-32PM1 70-79 years, male 20.6
GTEX-ZT9X-1926-SM-57WE7 40-49 years, male 20.6
GTEX-S95S-1326-SM-2XCDK 60-69 years, male 20.5
GTEX-ZYVF-0226-SM-5GIEG 50-59 years, female 20.4
GTEX-R55G-2426-SM-2TC5I 40-49 years, female 19.8
GTEX-XUZC-1826-SM-4BRVO 30-39 years, female 19.8
GTEX-ZXES-2026-SM-5NQ6R 30-39 years, female 19.7
Show all
Adipose - Visceral (Omentum)
RPKM: 16.0
Samples: 227

Max RPKM: 28.6
Min RPKM: 6.1
Std RPKM: 3.8
Median RPKM: 15.5
GTEX-ZYT6-2126-SM-5GZZ4 30-39 years, male 28.6
GTEX-12696-1826-SM-5EGJS 60-69 years, male 28.3
GTEX-13X6H-1726-SM-5Q5EH 50-59 years, female 25.6
GTEX-Y5LM-0826-SM-4VDSW 40-49 years, female 25.1
GTEX-ZQUD-0526-SM-57WG4 30-39 years, male 24.9
GTEX-11EQ9-1126-SM-5987I 30-39 years, male 24.7
GTEX-W5X1-1426-SM-3GIKH 40-49 years, female 24.6
GTEX-11XUK-1726-SM-5GU61 40-49 years, female 23.7
GTEX-13FH7-1926-SM-5J2OL 50-59 years, female 23.5
GTEX-ZYVF-1026-SM-5E44V 50-59 years, female 23.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

12.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 12.8
FF:10010-101C1 65,65,76 years, mixed 12.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.