Fields »
ABOUT
HELP
BLOG
STK38

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:37.4TPM
GTEx:30.3RPKM
FANTOM5:69.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
 

Antibody staining

Antibody HPA038623

  

Antibody CAB004673

  

Endothelial cells

 Medium   Medium  

Glandular cells

 Medium   High  
   
   

COLON - HPA RNA-seq

Average TPM

37.4
overview Male, age 54 Sample 1
TPM: 34.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 27.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 29.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 44.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 15.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 34.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 47.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 39.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 36.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 46.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 41.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 51.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 38.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

30.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 24.6
Samples: 149

Max RPKM: 37.1
Min RPKM: 16.7
Std RPKM: 4.2
Median RPKM: 24.5
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 37.1
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 36.6
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 36.1
GTEX-V955-1726-SM-4JBHF 60-69 years, male 33.5
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 33.3
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 32.9
GTEX-11TUW-2326-SM-5EQMO 60-69 years, male 31.8
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 31.6
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 31.6
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 31.2
Show all
Colon - Transverse
RPKM: 34.7
Samples: 196

Max RPKM: 60.3
Min RPKM: 13.7
Std RPKM: 10.4
Median RPKM: 35.2
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 60.3
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 59.7
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 55.9
GTEX-ZLV1-1226-SM-4WWBX 60-69 years, female 55.9
GTEX-R55G-1226-SM-48FDC 40-49 years, female 55.5
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 53.9
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 52.6
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 52.2
GTEX-R55D-1826-SM-48FEF 50-59 years, male 51.5
GTEX-11DXZ-1726-SM-5H12M 50-59 years, male 51.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

69.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 69.3
FF:10014-101C5 62,83,84 years, mixed 69.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.