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SOFT TISSUE - Expression summary

RNA expression
HPA:4.3TPM
GTEx:0.8RPKM
FANTOM5:2.1Tags Per Million

SOFT TISSUE 1 - Annotated protein expression
 

Antibody staining

Antibody HPA012500

  

Antibody CAB008625

  

Adipocytes

 Low   Medium  

Fibroblasts

 Medium   Medium  

Peripheral nerve

 Low  
      
   
   
   

SOFT TISSUE 2 - Annotated protein expression
 

Antibody staining

Antibody HPA012500

  

Antibody CAB008625

  

Adipocytes

 Medium   Low  

Fibroblasts

 High   Low  

Peripheral nerve

 Low  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

4.3
N/A Female, age 80 Sample 1
TPM: 2.8
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 8.2
N/A Female, age 57 Sample 3
TPM: 7.8
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 1.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 1.6
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

0.8

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 1.0
Samples: 350

Max RPKM: 5.6
Min RPKM: 0.0
Std RPKM: 0.8
Median RPKM: 0.8
GTEX-PX3G-0226-SM-3NB2C 20-29 years, female 5.6
GTEX-145ME-1926-SM-5SI9S 40-49 years, female 5.4
GTEX-OXRP-0226-SM-3NB14 60-69 years, female 5.2
GTEX-QLQW-1226-SM-2S1Q9 30-39 years, male 5.0
GTEX-ZVT2-2226-SM-5NQ6P 50-59 years, female 4.6
GTEX-Q2AG-0226-SM-2S1P4 40-49 years, female 4.0
GTEX-W5WG-2526-SM-4SOJ2 50-59 years, female 3.8
GTEX-R55G-2426-SM-2TC5I 40-49 years, female 3.7
GTEX-ZPCL-2126-SM-57WFZ 60-69 years, female 3.7
GTEX-11TUW-2626-SM-5EQKZ 60-69 years, male 3.6
Show all
Adipose - Visceral (Omentum)
RPKM: 0.6
Samples: 227

Max RPKM: 2.6
Min RPKM: 0.0
Std RPKM: 0.4
Median RPKM: 0.5
GTEX-W5X1-1426-SM-3GIKH 40-49 years, female 2.6
GTEX-ZF29-0826-SM-5S2NP 60-69 years, female 2.4
GTEX-ZPU1-1226-SM-5HL71 40-49 years, male 2.4
GTEX-Y5V5-0226-SM-5S2N8 60-69 years, female 2.2
GTEX-ZF2S-1526-SM-5S2OO 50-59 years, female 1.9
GTEX-11XUK-1726-SM-5GU61 40-49 years, female 1.8
GTEX-WYJK-1426-SM-3NM8V 50-59 years, male 1.8
GTEX-ZPCL-1026-SM-5GCOX 60-69 years, female 1.7
GTEX-1313W-1626-SM-5J1OE 50-59 years, female 1.6
GTEX-145LU-1226-SM-5LU9B 50-59 years, male 1.6
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

2.1

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 2.1
FF:10010-101C1 65,65,76 years, mixed 2.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.