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VNN1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:8.5TPM
GTEx:0.8RPKM
FANTOM5:758.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA064145

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  

Peripheral nerve/ganglion

 Not detected  
 
 
 

COLON - HPA RNA-seq

Average TPM

8.5
overview Male, age 54 Sample 1
TPM: 65
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 16.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 2.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 2.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 15.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 2.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.5
Samples: 149

Max RPKM: 28.0
Min RPKM: 0.0
Std RPKM: 2.2
Median RPKM: 0.2
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 28.0
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 2.4
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 1.7
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 1.4
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 1.3
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 1.2
GTEX-14BMU-1326-SM-5RQIH 20-29 years, female 1.2
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 1.2
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 1.1
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 1.1
Show all
Colon - Transverse
RPKM: 1.1
Samples: 196

Max RPKM: 83.5
Min RPKM: 0.0
Std RPKM: 6.0
Median RPKM: 0.3
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 83.5
GTEX-13PL7-2526-SM-5IFGR 60-69 years, female 11.4
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 8.4
GTEX-11DXX-1826-SM-5H126 60-69 years, female 8.1
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 4.6
GTEX-P4PP-1426-SM-3NM9L 30-39 years, female 4.1
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 3.4
GTEX-S4UY-0826-SM-4AD4Z 40-49 years, female 3.4
GTEX-ZVP2-1526-SM-5NQ82 50-59 years, male 2.3
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 2.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

758.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 758.0
FF:10014-101C5 62,83,84 years, mixed 758.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.