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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:110.3TPM
GTEx:107.6RPKM
FANTOM5:269.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Low
Peripheral nerve:Not detected
Chondrocytes:Not detected
 

Antibody staining

Antibody HPA028499

  

Antibody CAB003842

  

Antibody CAB018144

  

Adipocytes

 Not detected   Not detected   Not detected  

Fibroblasts

 Not detected   Medium   Not detected  

Peripheral nerve

 Not detected   Not detected   Not detected  

Chondrocytes

 Not detected  
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Low
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA028499

  

Antibody CAB003842

  

Antibody CAB018144

  

Adipocytes

 Not detected   Not detected   Not detected  

Fibroblasts

 Medium   Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected   Not detected  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

110.3
N/A Female, age 80 Sample 1
TPM: 165.5
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 71
N/A Female, age 57 Sample 3
TPM: 58.1
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 130.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 126.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

107.6

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 123.1
Samples: 350

Max RPKM: 329.2
Min RPKM: 37.2
Std RPKM: 40.2
Median RPKM: 122.3
GTEX-XBEC-0326-SM-4AT4M 50-59 years, male 329.2
GTEX-WVJS-0226-SM-4MVOU 50-59 years, male 267.4
GTEX-W5X1-2626-SM-4LMI8 40-49 years, female 265.1
GTEX-13PLJ-0126-SM-5L3HU 60-69 years, female 250.5
GTEX-UJHI-1626-SM-3DB9A 50-59 years, female 234.3
GTEX-12WSB-0226-SM-5GCOR 60-69 years, female 224.3
GTEX-11GSO-2326-SM-5A5LX 60-69 years, male 214.2
GTEX-131XF-2226-SM-5EQKG 60-69 years, male 212.6
GTEX-R55F-1426-SM-2TF53 50-59 years, male 207.2
GTEX-13FTY-0626-SM-5L3F8 40-49 years, female 206.7
Show all
Adipose - Visceral (Omentum)
RPKM: 83.8
Samples: 227

Max RPKM: 175.6
Min RPKM: 25.2
Std RPKM: 26.7
Median RPKM: 82.2
GTEX-X585-2526-SM-4QAS1 50-59 years, male 175.6
GTEX-1117F-1326-SM-5EGHH 60-69 years, female 169.5
GTEX-13NZ9-2026-SM-5KM1U 50-59 years, male 164.7
GTEX-X8HC-2326-SM-4QAS4 50-59 years, female 163.3
GTEX-1192X-1526-SM-5H11I 50-59 years, male 158.4
GTEX-WWTW-1326-SM-4MVNT 50-59 years, male 150.8
GTEX-XUZC-1126-SM-4BOPZ 30-39 years, female 146.7
GTEX-1128S-0926-SM-5GZZU 60-69 years, female 145.2
GTEX-13N11-1826-SM-5IJDS 50-59 years, female 144.1
GTEX-UPK5-1826-SM-3GAEB 40-49 years, male 138.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

269.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 269.9
FF:10010-101C1 65,65,76 years, mixed 269.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.