Fields »
ABOUT
HELP
BLOG
ACVR2B

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:1.1TPM
GTEx:1.1RPKM
FANTOM5:5.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody CAB025115

  

Endothelial cells

 Medium  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

1.1
overview Male, age 54 Sample 1
TPM: 1.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 1.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 1.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 1.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

1.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.2
Samples: 149

Max RPKM: 2.3
Min RPKM: 0.2
Std RPKM: 0.3
Median RPKM: 1.2
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 2.3
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 2.2
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 2.1
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 2.0
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 1.9
GTEX-WHWD-1526-SM-4OORV 50-59 years, male 1.9
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 1.9
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 1.8
GTEX-WHPG-1626-SM-4M1ZL 50-59 years, male 1.8
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 1.8
Show all
Colon - Transverse
RPKM: 1.0
Samples: 196

Max RPKM: 2.5
Min RPKM: 0.3
Std RPKM: 0.3
Median RPKM: 1.0
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 2.5
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 1.9
GTEX-S341-1426-SM-4AD6U 40-49 years, female 1.7
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 1.7
GTEX-11VI4-1526-SM-5EQKC 40-49 years, female 1.6
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 1.6
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 1.6
GTEX-O5YW-1426-SM-3MJHF 50-59 years, male 1.6
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 1.6
GTEX-XQ8I-2126-SM-4BOOM 50-59 years, male 1.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

5.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 5.4
FF:10014-101C5 62,83,84 years, mixed 5.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.