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GORASP1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:19.6TPM
GTEx:8.5RPKM
FANTOM5:26.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA056283

  

Endothelial cells

 Low  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

19.6
overview Male, age 54 Sample 1
TPM: 9.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 15.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 14.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 10.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 8.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 24.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 25
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 27.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 24.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 25.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 28.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 22
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 19.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 6.9
Samples: 149

Max RPKM: 10.4
Min RPKM: 2.2
Std RPKM: 1.7
Median RPKM: 7.1
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 10.4
GTEX-13O61-1526-SM-5KM3P 60-69 years, male 10.4
GTEX-XBED-1726-SM-47JYO 60-69 years, male 10.1
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 10.1
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 10.1
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 10.1
GTEX-XUJ4-2126-SM-4BOOX 60-69 years, female 9.9
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 9.7
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 9.7
GTEX-V955-1726-SM-4JBHF 60-69 years, male 9.6
Show all
Colon - Transverse
RPKM: 9.7
Samples: 196

Max RPKM: 14.0
Min RPKM: 3.7
Std RPKM: 2.1
Median RPKM: 9.8
GTEX-UJMC-1326-SM-4IHLS 50-59 years, male 14.0
GTEX-R55D-1826-SM-48FEF 50-59 years, male 13.9
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 13.7
GTEX-131XE-0826-SM-5HL9W 50-59 years, male 13.6
GTEX-11LCK-2026-SM-5A5MA 30-39 years, male 13.4
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 13.3
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 13.0
GTEX-PWN1-1426-SM-48TDF 40-49 years, female 13.0
GTEX-PLZ5-1126-SM-3P613 50-59 years, male 12.9
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 12.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

26.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 26.0
FF:10014-101C5 62,83,84 years, mixed 26.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.