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NEK4

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:7.4TPM
GTEx:3.9RPKM
FANTOM5:15.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA015750

  

Endothelial cells

 Not detected  

Glandular cells

 Low  

Peripheral nerve/ganglion

 Not detected  
 
 

COLON - HPA RNA-seq

Average TPM

7.4
overview Male, age 54 Sample 1
TPM: 8.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 6.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 7.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 6.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 5.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 7.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 7.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 7.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 8.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 9.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 9.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 8.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 4.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

3.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 4.3
Samples: 149

Max RPKM: 7.4
Min RPKM: 2.3
Std RPKM: 0.9
Median RPKM: 4.2
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 7.4
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 7.3
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 7.0
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 7.0
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 6.6
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 6.4
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 6.3
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 6.0
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 5.8
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 5.7
Show all
Colon - Transverse
RPKM: 3.6
Samples: 196

Max RPKM: 6.9
Min RPKM: 1.6
Std RPKM: 0.9
Median RPKM: 3.5
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 6.9
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 6.0
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 5.9
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 5.5
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 5.5
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 5.5
GTEX-1128S-1626-SM-5H12O 60-69 years, female 5.4
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 5.4
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 5.4
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 5.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

15.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 15.8
FF:10014-101C5 62,83,84 years, mixed 15.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.