We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ACADM
  • premium

    TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:12.5RPKM
FANTOM5:44.8Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Low
 

Antibody staining

Antibody HPA006198

 

Antibody HPA026542

 

Glial cells

Low   Low  

Neuronal cells

Low   Low  
   
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

12.5

GTEx sample id

Sample description

RPKM

Brain - Hippocampus
RPKM: 12.5
Samples: 94

Max RPKM: 23.4
Min RPKM: 4.6
Std RPKM: 3.5
Median RPKM: 13.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 23.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 20.6
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 19.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 18.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 18.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 18.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 17.9
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 17.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 17.2
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 17.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 16.7
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 16.6
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 16.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 15.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 15.8
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 15.8
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 15.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 15.7
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 15.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 15.0
GTEX-N7MT-0011-R1a-SM-5SI7S 60-69 years, female 14.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 14.8
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 14.8
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 14.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 14.7
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 14.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 14.5
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 14.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 14.3
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 14.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 14.0
GTEX-RNOR-0011-R1A-SM-5SI8F 50-59 years, female 14.0
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 13.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 13.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 13.8
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 13.7
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 13.7
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 13.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 13.7
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 13.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 13.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 13.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 13.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 13.4
GTEX-XOTO-0011-R1B-SM-4B65C 50-59 years, male 13.2
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 13.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 13.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 13.0
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 12.8
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 12.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 12.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 11.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 11.9
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 11.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 11.8
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 11.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 11.6
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 11.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 11.6
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 11.4
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 11.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 11.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 10.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 10.6
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 10.6
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 10.5
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 10.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 10.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 10.1
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 10.1
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 10.1
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 10.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 9.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 9.6
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 9.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 9.4
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 9.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 9.2
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 8.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 8.7
GTEX-12WSB-0011-R1b-SM-5P9EY 60-69 years, female 8.6
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 8.5
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 8.0
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 7.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 7.8
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 7.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 7.4
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 7.3
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 6.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 6.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 5.9
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 5.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 4.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 4.6
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

44.8

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 52.7
FF:10153-102I9 76 years, female 63.8
FF:10169-103B7 60 years, female 41.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.