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CDC20

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:14.6TPM
GTEx:4.5RPKM
FANTOM5:6.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA055288

  

Antibody CAB004525

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Medium   Medium  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   

COLON - HPA RNA-seq

Average TPM

14.6
overview Male, age 54 Sample 1
TPM: 11.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 6.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 16.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 17.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 29.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 17.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 20.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 25.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 12.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 12.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 9.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

4.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.3
Samples: 149

Max RPKM: 4.8
Min RPKM: 0.0
Std RPKM: 0.6
Median RPKM: 0.2
GTEX-V955-1726-SM-4JBHF 60-69 years, male 4.8
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 4.4
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 3.0
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 2.6
GTEX-XBED-1726-SM-47JYO 60-69 years, male 2.4
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 2.3
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 1.0
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 1.0
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 0.9
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 0.9
Show all
Colon - Transverse
RPKM: 7.7
Samples: 196

Max RPKM: 53.7
Min RPKM: 0.0
Std RPKM: 8.4
Median RPKM: 5.4
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 53.7
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 44.2
GTEX-QMRM-1226-SM-447C6 50-59 years, male 32.5
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 28.6
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 28.5
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 28.2
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 27.7
GTEX-144GN-1126-SM-5LU33 50-59 years, male 27.3
GTEX-QCQG-1626-SM-48U26 50-59 years, female 25.2
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 24.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

6.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 6.2
FF:10014-101C5 62,83,84 years, mixed 6.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.