We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PRDX1
  • TISSUE

  • premium

    CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:356.7TPM
GTEx:122.0RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Medium
Neuronal cells:Medium
Neuropil:Low
 

Antibody staining

Antibody HPA007730

 

Antibody CAB004682

 

Endothelial cells

Low   Not detected  

Glial cells

Medium   Medium  

Neuronal cells

Low   Medium  

Neuropil

Low   Low  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

356.7

N/A Male, age 5 Sample 1
TPM: 437.9
overview Female, age 40 Sample 2
TPM: 218.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70 Sample 3
TPM: 413.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

122.0

GTEx sample id

Sample description

RPKM

Brain - Cortex
RPKM: 121.9
Samples: 114

Max RPKM: 258.5
Min RPKM: 62.7
Std RPKM: 24.9
Median RPKM: 118.7
GTEX-144FL-3026-SM-5O99C 50-59 years, male 258.5
GTEX-139T8-1026-SM-5J2MC 60-69 years, male 187.8
GTEX-NPJ8-1526-SM-2D7VU 40-49 years, male 166.2
GTEX-13X6K-2926-SM-5Q5D5 60-69 years, female 166.0
GTEX-NPJ7-2726-SM-2I3FT 60-69 years, female 165.7
GTEX-QVJO-1426-SM-2S1QY 60-69 years, female 164.8
GTEX-ZE7O-3126-SM-5HL5X 50-59 years, female 162.5
GTEX-PWO3-0926-SM-2I5EY 60-69 years, female 161.6
GTEX-1192X-3126-SM-5N9BY 50-59 years, male 160.3
GTEX-QVUS-2826-SM-3GADB 60-69 years, female 159.5
GTEX-RU72-3026-SM-5SI7Y 50-59 years, female 159.4
GTEX-132Q8-3026-SM-5PNVG 60-69 years, male 157.5
GTEX-13FHO-3026-SM-5J1O9 60-69 years, male 148.5
GTEX-13NYS-3126-SM-5KLYV 60-69 years, male 147.2
GTEX-12WSD-3126-SM-5HL7P 60-69 years, female 147.1
GTEX-11GSP-3226-SM-5986O 60-69 years, female 146.7
GTEX-ZZPT-3026-SM-5GZXH 50-59 years, male 145.1
GTEX-11EI6-3026-SM-5GZZO 60-69 years, male 142.7
GTEX-13G51-3026-SM-5IJB8 60-69 years, male 142.1
GTEX-UTHO-3026-SM-3GAFB 60-69 years, male 141.5
GTEX-13JUV-2926-SM-5LZX7 40-49 years, female 141.4
GTEX-12WSA-2926-SM-5EQ4D 60-69 years, male 139.2
GTEX-13OW8-2826-SM-5L3GC 60-69 years, male 136.7
GTEX-OXRN-2426-SM-2I5EQ 50-59 years, male 136.2
GTEX-11TTK-2926-SM-5PNYP 60-69 years, female 135.4
GTEX-ZAK1-3026-SM-5S2MJ 50-59 years, female 134.5
GTEX-14A5I-2926-SM-5Q5CQ 50-59 years, female 132.2
GTEX-13QIC-2926-SM-5J2NF 60-69 years, female 131.9
GTEX-11DXY-3226-SM-5GIDE 60-69 years, male 131.5
GTEX-1399T-3026-SM-5KLZC 60-69 years, male 131.5
GTEX-X4XX-3026-SM-3NMB2 60-69 years, male 131.2
GTEX-13IVO-2926-SM-5L3CZ 70-79 years, male 130.7
GTEX-1445S-3026-SM-5O9BR 60-69 years, male 130.3
GTEX-12ZZW-2926-SM-5LZUP 50-59 years, male 129.2
GTEX-12ZZZ-3026-SM-5BC67 60-69 years, male 128.8
GTEX-X585-3026-SM-46MWF 50-59 years, male 128.1
GTEX-13JVG-3126-SM-5L3FH 60-69 years, male 128.0
GTEX-14BMV-3026-SM-5S2PQ 50-59 years, male 128.0
GTEX-145MG-3026-SM-5RQJA 50-59 years, male 127.9
GTEX-12ZZY-3026-SM-5GCOU 60-69 years, male 126.9
GTEX-11OC5-0726-SM-5P9JK 60-69 years, male 126.6
GTEX-13NYC-2826-SM-5K7WR 60-69 years, male 126.6
GTEX-ZVT3-3026-SM-5E43N 60-69 years, female 126.0
GTEX-11EMC-3226-SM-5EGKW 60-69 years, female 125.7
GTEX-11GSO-2926-SM-5HL73 60-69 years, male 125.7
GTEX-131XW-3126-SM-5LZUC 50-59 years, female 125.6
GTEX-144GL-3026-SM-5Q5CW 50-59 years, male 122.9
GTEX-11NUK-2926-SM-5A5MD 50-59 years, male 122.6
GTEX-11ONC-2926-SM-5P9JM 60-69 years, male 122.6
GTEX-XLM4-3026-SM-4AT6L 60-69 years, male 122.0
GTEX-R55F-1326-SM-5S2V4 50-59 years, male 121.5
GTEX-WZTO-2926-SM-3NM9I 40-49 years, male 120.5
GTEX-1128S-2726-SM-5H12C 60-69 years, female 120.3
GTEX-13OW6-3026-SM-5J2MI 50-59 years, male 120.1
GTEX-QMR6-1426-SM-32PLA 50-59 years, male 119.3
GTEX-11GS4-3126-SM-5A5LH 60-69 years, male 118.9
GTEX-145LS-3126-SM-5Q5BY 60-69 years, female 118.8
GTEX-14ASI-3026-SM-5S2PN 60-69 years, male 118.5
GTEX-13FLW-1426-SM-5K7YE 50-59 years, male 117.6
GTEX-Y8DK-0826-SM-4TT3T 60-69 years, male 117.6
GTEX-13NYB-3026-SM-5IJD7 40-49 years, male 116.9
GTEX-WWYW-3126-SM-3NB39 50-59 years, female 116.0
GTEX-11PRG-2926-SM-5987A 50-59 years, male 115.9
GTEX-QDT8-2926-SM-32PKC 30-39 years, female 115.8
GTEX-111FC-3126-SM-5GZZ2 60-69 years, male 115.6
GTEX-12WSC-3026-SM-5GCNF 50-59 years, male 115.4
GTEX-N7MT-1126-SM-5SI7V 60-69 years, female 114.3
GTEX-WHSE-3026-SM-3P5ZH 20-29 years, male 114.0
GTEX-13FHP-3026-SM-5IJBS 50-59 years, male 113.6
GTEX-WVLH-3026-SM-3MJG9 50-59 years, male 111.9
GTEX-13X6J-3026-SM-5Q5CU 50-59 years, male 111.8
GTEX-1117F-3226-SM-5N9CT 60-69 years, female 111.6
GTEX-11DXW-1126-SM-5H12Q 40-49 years, male 111.6
GTEX-13FXS-3126-SM-5J2NN 50-59 years, male 110.9
GTEX-YJ89-3026-SM-5IFJI 60-69 years, male 110.9
GTEX-13OVH-3026-SM-5MR4N 70-79 years, male 110.5
GTEX-12WSH-3026-SM-5CVNI 50-59 years, male 110.2
GTEX-13S7M-3126-SM-5RQJQ 60-69 years, female 109.4
GTEX-131YS-3126-SM-5KLYT 60-69 years, female 107.9
GTEX-13SLX-3126-SM-5S2Q5 50-59 years, female 107.8
GTEX-1313W-3126-SM-5LZUI 50-59 years, female 106.8
GTEX-13O3Q-2926-SM-5KM45 50-59 years, male 106.5
GTEX-RNOR-2326-SM-2TF4I 50-59 years, female 106.2
GTEX-117XS-3026-SM-5N9CA 60-69 years, male 105.9
GTEX-13O3O-3126-SM-5KM3H 60-69 years, female 105.4
GTEX-13OVJ-2826-SM-5L3GW 50-59 years, female 105.3
GTEX-145MF-2726-SM-5O995 50-59 years, male 105.3
GTEX-T2IS-3026-SM-32QPM 20-29 years, female 104.8
GTEX-13OW7-3026-SM-5L3GY 50-59 years, male 104.2
GTEX-ZYFD-3026-SM-5E44C 50-59 years, male 103.7
GTEX-ZUA1-3026-SM-59HJC 40-49 years, male 103.0
GTEX-T6MN-2626-SM-32PMQ 50-59 years, male 102.9
GTEX-147GR-3026-SM-5S2ML 60-69 years, male 102.4
GTEX-12ZZX-2926-SM-5GCOQ 40-49 years, female 102.3
GTEX-145MH-3026-SM-5Q5DZ 50-59 years, male 102.0
GTEX-PVOW-2526-SM-2XCF7 40-49 years, male 101.9
GTEX-YFC4-3126-SM-5PNV6 40-49 years, female 101.7
GTEX-13PL6-3126-SM-5LUAR 40-49 years, female 101.4
GTEX-XOTO-3026-SM-4B65M 50-59 years, male 101.1
GTEX-Y111-2726-SM-4TT3N 50-59 years, male 100.3
GTEX-WL46-2926-SM-3LK82 50-59 years, male 98.6
GTEX-Q2AG-2926-SM-2HMJ3 40-49 years, female 98.5
GTEX-13VXU-2926-SM-5LU5C 50-59 years, male 97.9
GTEX-11NV4-2126-SM-5N9DS 60-69 years, male 97.6
GTEX-TSE9-3026-SM-3DB76 60-69 years, female 97.0
GTEX-T5JC-2426-SM-3NMDB 20-29 years, male 95.4
GTEX-11WQK-3026-SM-5EQL6 50-59 years, male 94.9
GTEX-12126-1026-SM-5P9JJ 20-29 years, male 93.9
GTEX-13PVQ-3026-SM-5SI93 50-59 years, male 91.0
GTEX-11O72-2926-SM-5BC4V 40-49 years, male 85.0
GTEX-ZAJG-3126-SM-5HL9J 50-59 years, female 85.0
GTEX-11ZUS-2926-SM-5FQSL 30-39 years, male 81.6
GTEX-Z93S-2926-SM-57WB9 50-59 years, male 79.1
GTEX-11OF3-2926-SM-5HL78 60-69 years, male 62.7
Show all
Brain - Frontal Cortex (BA9)
RPKM: 122.1
Samples: 108

Max RPKM: 279.0
Min RPKM: 76.8
Std RPKM: 29.5
Median RPKM: 114.3
GTEX-12WSD-0011-R10b-SM-5GU79 60-69 years, female 279.0
GTEX-12ZZY-0011-R10b-SM-5HL7W 60-69 years, male 200.7
GTEX-1445S-0011-R10a-SM-5PNWB 60-69 years, male 196.9
GTEX-12WSA-0011-R10b-SM-5P9ET 60-69 years, male 190.0
GTEX-13NYS-0011-R10a-SM-5MR4S 60-69 years, male 176.5
GTEX-QVUS-0011-R10A-SM-3GIK3 60-69 years, female 168.2
GTEX-13JUV-0011-R10b-SM-5LZXR 40-49 years, female 166.5
GTEX-NPJ7-0011-R10A-SM-2I3E5 60-69 years, female 165.8
GTEX-RVPU-0011-R10A-SM-2XCAH 50-59 years, male 165.4
GTEX-139TS-0011-R10a-SM-5K7TU 60-69 years, male 164.1
GTEX-NL4W-0011-R10A-SM-2I3DY 50-59 years, male 158.0
GTEX-XMD1-0011-R10A-SM-4AT4A 60-69 years, male 156.8
GTEX-11H98-0011-R10b-SM-5NQ98 50-59 years, male 156.1
GTEX-P44H-0011-R10A-SM-2XCEK 40-49 years, male 154.8
GTEX-13X6K-0011-R10a-SM-5P9JR 60-69 years, female 152.8
GTEX-13N2G-0011-R10a-SM-5MR34 60-69 years, male 151.1
GTEX-NPJ8-0011-R10A-SM-2YUMO 40-49 years, male 149.3
GTEX-13SLW-0011-R10a-SM-5S2UI 70-79 years, male 147.9
GTEX-14BIL-0011-R10a-SM-5SI75 50-59 years, male 147.8
GTEX-132Q8-0011-R10b-SM-5DUWZ 60-69 years, male 146.6
GTEX-11WQC-0011-R10a-SM-57WCT 60-69 years, male 145.9
GTEX-ZV68-0011-R10a-SM-51MT7 50-59 years, female 144.5
GTEX-147GR-0011-R10b-SM-5S2UM 60-69 years, male 142.2
GTEX-11GSP-0011-R10a-SM-5NQ7J 60-69 years, female 142.1
GTEX-WWYW-0011-R10A-SM-3NB35 50-59 years, female 140.8
GTEX-13OW8-0011-R10a-SM-5L3H6 60-69 years, male 138.7
GTEX-13X6I-0011-R10a-SM-5PNWI 60-69 years, male 136.8
GTEX-1477Z-0011-R10b-SM-5S2RF 60-69 years, male 134.0
GTEX-ZAB4-0011-R10a-SM-4SOKH 40-49 years, male 132.1
GTEX-12ZZW-0011-R10b-SM-5HL9X 50-59 years, male 129.4
GTEX-14ASI-0011-R10b-SM-5S2VZ 60-69 years, male 128.9
GTEX-13O3O-0011-R10a-SM-5LUA9 60-69 years, female 128.0
GTEX-X4EP-0011-R10B-SM-4QASJ 60-69 years, female 127.7
GTEX-OXRN-0011-R10A-SM-2I5GC 50-59 years, male 127.6
GTEX-ZDXO-0011-R10a-SM-4WWD8 60-69 years, male 126.9
GTEX-13RTJ-0011-R10b-SM-5O9CW 60-69 years, male 126.4
GTEX-XLM4-0011-R10A-SM-4AT5P 60-69 years, male 124.1
GTEX-QMR6-0011-R10A-SM-32PKO 50-59 years, male 123.9
GTEX-13FHO-0011-R10b-SM-5J2MM 60-69 years, male 123.7
GTEX-145LU-0011-R10a-SM-5PNWJ 50-59 years, male 123.7
GTEX-145MG-0011-R10a-SM-5PNWG 50-59 years, male 122.9
GTEX-131XW-0011-R10a-SM-5DUVA 50-59 years, female 122.7
GTEX-ZVZQ-0011-R10b-SM-51MRT 60-69 years, female 121.7
GTEX-ZF28-0011-R10a-SM-4WWEH 60-69 years, male 121.3
GTEX-QVJO-0011-R10A-SM-2S1QJ 60-69 years, female 120.7
GTEX-OXRO-0011-R10A-SM-2I5EH 60-69 years, female 118.7
GTEX-ZUA1-0011-R10a-SM-51MT6 40-49 years, male 117.4
GTEX-ZVT3-0011-R10b-SM-57WB6 60-69 years, female 116.6
GTEX-13OW6-0011-R10a-SM-5L3HE 50-59 years, male 115.4
GTEX-14BIN-0011-R10a-SM-5S2UA 50-59 years, female 115.3
GTEX-S7SE-0011-R10A-SM-2XCDF 50-59 years, male 115.0
GTEX-12WSH-0011-R10a-SM-5LZUS 50-59 years, male 114.6
GTEX-13FXS-0011-R10a-SM-5J2MA 50-59 years, male 114.5
GTEX-13O3Q-0011-R10b-SM-5KM39 50-59 years, male 114.3
GTEX-13OVJ-0011-R10b-SM-5L3HT 50-59 years, female 114.2
GTEX-147F4-0011-R10b-SM-5S2WC 50-59 years, male 114.1
GTEX-N7MT-0011-R10A-SM-2I3E1 60-69 years, female 113.7
GTEX-13QIC-0011-R10a-SM-5O9C7 60-69 years, female 113.3
GTEX-13CZV-0011-R10b-SM-5LZYD 60-69 years, male 113.2
GTEX-TSE9-0011-R10A-SM-3DB7O 60-69 years, female 113.1
GTEX-12WSF-0011-R10a-SM-5LZVH 70-79 years, male 112.4
GTEX-X4XX-0011-R10B-SM-46MWO 60-69 years, male 112.1
GTEX-YFC4-0011-R10a-SM-4SOK5 40-49 years, female 111.8
GTEX-13FLW-0011-R10b-SM-5LZZF 50-59 years, male 111.4
GTEX-13FTZ-0011-R10b-SM-5KLZS 60-69 years, male 111.3
GTEX-YJ89-0011-R10a-SM-4SOK9 60-69 years, male 111.2
GTEX-13SLX-0011-R10a-SM-5P9HV 50-59 years, female 111.0
GTEX-13X6J-0011-R10b-SM-5PNWA 50-59 years, male 110.3
GTEX-12WSC-0011-R10a-SM-5GU57 50-59 years, male 109.8
GTEX-X585-0011-R10A-SM-46MUY 50-59 years, male 108.4
GTEX-NL3H-0011-R10A-SM-2I3E9 60-69 years, male 108.1
GTEX-11ZUS-0011-R10b-SM-5BC79 30-39 years, male 107.9
GTEX-Y8DK-0011-R10A-SM-4SOK1 60-69 years, male 107.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 50-59 years, male 107.7
GTEX-14753-0011-R10b-SM-5S2WE 60-69 years, male 107.7
GTEX-T5JC-0011-R10A-SM-32PM2 20-29 years, male 106.2
GTEX-T6MN-0011-R10A-SM-32QP7 50-59 years, male 105.6
GTEX-13QJC-0011-R10a-SM-5SI63 60-69 years, female 105.3
GTEX-13S7M-0011-R10b-SM-5PNZB 60-69 years, female 105.2
GTEX-12WSM-0011-R10a-SM-5DUWV 60-69 years, male 104.5
GTEX-WVLH-0011-R10A-SM-3MJFM 50-59 years, male 104.5
GTEX-13NYB-0011-R10a-SM-5KM43 40-49 years, male 104.1
GTEX-13JVG-0011-R10b-SM-5KM2P 60-69 years, male 104.0
GTEX-N7MS-0011-R10A-SM-2HMJK 60-69 years, male 102.7
GTEX-ZE7O-0011-R10a-SM-57WAZ 50-59 years, female 102.6
GTEX-13OVL-0011-R10a-SM-5L3GS 50-59 years, male 102.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC 60-69 years, male 101.1
GTEX-Z93S-0011-R10a-SM-4RGNM 50-59 years, male 100.7
GTEX-13OW7-0011-R10a-SM-5L3H3 50-59 years, male 99.5
GTEX-131YS-0011-R10b-SM-5EQ5N 60-69 years, female 99.1
GTEX-131XH-0011-R10a-SM-5EGLJ 50-59 years, male 98.9
GTEX-145LS-0011-R10a-SM-5PNUQ 60-69 years, female 97.5
GTEX-QDT8-0011-R10A-SM-32PKG 30-39 years, female 97.1
GTEX-12126-0011-R10b-SM-5BC6T 20-29 years, male 96.9
GTEX-13NZA-0011-R10b-SM-5KM54 60-69 years, male 96.7
GTEX-12ZZX-0011-R10b-SM-5DUWK 40-49 years, female 94.9
GTEX-1313W-0011-R10b-SM-5DUXA 50-59 years, female 93.6
GTEX-ZXG5-0011-R10a-SM-57WDD 60-69 years, male 93.6
GTEX-145MH-0011-R10b-SM-5PNUK 50-59 years, male 93.5
GTEX-11WQK-0011-R10a-SM-5BC6R 50-59 years, male 92.5
GTEX-WZTO-0011-R10B-SM-4E3KB 40-49 years, male 91.4
GTEX-13G51-0011-R10b-SM-5LZYF 60-69 years, male 87.4
GTEX-Q2AG-0011-R10A-SM-2HMLA 40-49 years, female 87.3
GTEX-13IVO-0011-R10a-SM-5LZY3 70-79 years, male 83.5
GTEX-WL46-0011-R10A-SM-3MJFQ 50-59 years, male 80.8
GTEX-12WSE-0011-R10b-SM-5P9JV 20-29 years, male 80.0
GTEX-X261-0011-R10B-SM-4E3JT 50-59 years, male 77.2
GTEX-13N1W-0011-R10b-SM-5MR4H 70-79 years, male 76.8
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.