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PRDX1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:302.5TPM
GTEx:122.0RPKM
FANTOM5:301.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA007730

  

Antibody CAB004682

  

Endothelial cells

 Medium   Not detected  

Glandular cells

 Medium   Medium  

Peripheral nerve/ganglion

 Medium   Not detected  
   
   

COLON - HPA RNA-seq

Average TPM

302.5
overview Male, age 54 Sample 1
TPM: 231.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 211.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 223.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 347.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 287.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 410.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 423.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 221.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 319.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 394.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 275.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 309.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 276.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

122.0

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 116.0
Samples: 149

Max RPKM: 275.8
Min RPKM: 49.6
Std RPKM: 29.1
Median RPKM: 110.9
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 275.8
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 207.6
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 199.7
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 179.3
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 178.8
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 171.1
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 168.2
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 168.2
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 164.9
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 163.4
Show all
Colon - Transverse
RPKM: 126.6
Samples: 196

Max RPKM: 267.0
Min RPKM: 74.3
Std RPKM: 30.4
Median RPKM: 121.1
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 267.0
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 216.2
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 210.9
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 208.4
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 198.8
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 193.8
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 192.7
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 192.2
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 191.2
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 187.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

301.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 301.1
FF:10014-101C5 62,83,84 years, mixed 301.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.