Fields »
ABOUT
HELP
BLOG
ARG1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:0.3TPM
GTEx:0.4RPKM
FANTOM5:0.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA003595

  

Antibody HPA024006

  

Antibody CAB009434

  

Antibody CAB056159

  

Endothelial cells

 Not detected   Not detected   Low   Not detected  

Glandular cells

 Not detected   Not detected   Low   Not detected  

Peripheral nerve/ganglion

 Not detected   Not detected   Not detected   Not detected  
       
       
       

COLON - HPA RNA-seq

Average TPM

0.3
overview Male, age 54 Sample 1
TPM: 0.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.1
Samples: 149

Max RPKM: 2.2
Min RPKM: 0.0
Std RPKM: 0.2
Median RPKM: 0.1
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 2.2
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 1.4
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 1.4
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 1.2
GTEX-ZA64-1426-SM-5CVMC 20-29 years, male 1.2
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 0.9
GTEX-11ZTT-1626-SM-5EQKR 60-69 years, female 0.8
GTEX-Y3I4-1126-SM-4TT7Y 50-59 years, male 0.7
GTEX-11EM3-1626-SM-5N9CO 20-29 years, female 0.6
GTEX-WFG7-1626-SM-4LVMF 20-29 years, male 0.6
Show all
Colon - Transverse
RPKM: 0.6
Samples: 196

Max RPKM: 80.6
Min RPKM: 0.0
Std RPKM: 5.7
Median RPKM: 0.1
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 80.6
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 1.0
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 0.8
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 0.8
GTEX-SNMC-1126-SM-4DM5M 20-29 years, male 0.7
GTEX-NFK9-2026-SM-3LK5K 40-49 years, male 0.6
GTEX-PLZ6-0926-SM-3P5ZQ 30-39 years, male 0.6
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 0.6
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 0.5
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 0.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

0.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 0.2
FF:10014-101C5 62,83,84 years, mixed 0.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.