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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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SPP1
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PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

SPP1

Gene description

Secreted phosphoprotein 1

Protein class

Cancer-related genes
Plasma proteins
Predicted secreted proteins

Predicted localization

Secreted

Number of transcripts

5
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Group enriched (EFO-21, Hep G2, RPTEC TERT1)
HPA (normal tissue):Tissue enhanced (gallbladder, kidney, placenta)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in a subset of tissues, most abundant in renal tubules and gallbladder.

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data. Secreted protein, tissue location of RNA and protein might differ and correlation is complex.

Reliability score

Approved based on 2 antibodies.
HPA027541 , CAB002212
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PROGNOSTIC SUMMARY

Prognostic marker in liver cancer (unfavourable), pancreatic cancer (unfavourable) and cervical cancer (unfavourable).
Liver cancer p<0.001
Pancreatic cancer p<0.001
Cervical cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA027541
CAB002212

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Several endometrial cancers along with a few cases of melanomas, liver and renal cancers displayed moderate to strong cytoplasmic immunoreactivity. Remaining cancer tissues were weakly stained or negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

A majority of cancer tissues displayed moderate to strong cytoplasmic immunoreactivity. Some lymphomas and lung cancers were weaker stained.

GENE INFORMATION

Gene name

SPP1 (HGNC Symbol)

Synonyms

BNSP, BSPI, ETA-1, OPN

Description

Secreted phosphoprotein 1 (HGNC Symbol)

Entrez gene summary

The protein encoded by this gene is involved in the attachment of osteoclasts to the mineralized bone matrix. The encoded protein is secreted and binds hydroxyapatite with high affinity. The osteoclast vitronectin receptor is found in the cell membrane and may be involved in the binding to this protein. This protein is also a cytokine that upregulates expression of interferon-gamma and interleukin-12. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2011]

Chromosome

4

Cytoband

q22.1

Chromosome location (bp)

87975650 - 87983426

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000118785 (version 83.38)

Entrez gene

6696

UniProt

P10451 (UniProt - Evidence at protein level)

neXtProt

NX_P10451

Antibodypedia

SPP1 antibodies

PROTEIN BROWSER

SPP1-001
SPP1-002
SPP1-003
SPP1-010
SPP1-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

SPP1-001
ENSP00000378517
ENST00000395080
P10451 [Direct mapping]
Osteopontin
A0A024RDE2 [Target identity:100%; Query identity:100%]
Secreted phosphoprotein 1 (Osteopontin, bone sialoprotein I, early T-lymphocyte activation 1), isoform CRA_b
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001503 [ossification]
GO:0001649 [osteoblast differentiation]
GO:0005125 [cytokine activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0005737 [cytoplasm]
GO:0006954 [inflammatory response]
GO:0007155 [cell adhesion]
GO:0007566 [embryo implantation]
GO:0010033 [response to organic substance]
GO:0010811 [positive regulation of cell-substrate adhesion]
GO:0022617 [extracellular matrix disassembly]
GO:0030154 [cell differentiation]
GO:0030198 [extracellular matrix organization]
GO:0030593 [neutrophil chemotaxis]
GO:0031214 [biomineral tissue development]
GO:0031988 [membrane-bounded vesicle]
GO:0033280 [response to vitamin D]
GO:0042995 [cell projection]
GO:0045177 [apical part of cell]
GO:0045780 [positive regulation of bone resorption]
GO:0046697 [decidualization]
GO:0048471 [perinuclear region of cytoplasm]
GO:0048545 [response to steroid hormone]
GO:0048685 [negative regulation of collateral sprouting of intact axon in response to injury]
GO:0050840 [extracellular matrix binding]
GO:0070062 [extracellular exosome]
GO:0071498 [cellular response to fluid shear stress]
Show all
314 aa
35.4 kDa
Yes 0
SPP1-002
ENSP00000237623
ENST00000237623
P10451 [Direct mapping]
Osteopontin
A0A024RDE6 [Target identity:100%; Query identity:100%]
Secreted phosphoprotein 1 (Osteopontin, bone sialoprotein I, early T-lymphocyte activation 1), isoform CRA_c
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001503 [ossification]
GO:0005125 [cytokine activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0007155 [cell adhesion]
GO:0007566 [embryo implantation]
GO:0022617 [extracellular matrix disassembly]
GO:0030198 [extracellular matrix organization]
GO:0031214 [biomineral tissue development]
GO:0033280 [response to vitamin D]
GO:0046697 [decidualization]
GO:0070062 [extracellular exosome]
Show all
300 aa
33.8 kDa
Yes 0
SPP1-003
ENSP00000354042
ENST00000360804
P10451 [Direct mapping]
Osteopontin
A0A024RDJ0 [Target identity:100%; Query identity:100%]
Secreted phosphoprotein 1 (Osteopontin, bone sialoprotein I, early T-lymphocyte activation 1), isoform CRA_a
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001503 [ossification]
GO:0005125 [cytokine activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0007155 [cell adhesion]
GO:0007566 [embryo implantation]
GO:0022617 [extracellular matrix disassembly]
GO:0030198 [extracellular matrix organization]
GO:0031214 [biomineral tissue development]
GO:0033280 [response to vitamin D]
GO:0046697 [decidualization]
GO:0070062 [extracellular exosome]
Show all
287 aa
32.4 kDa
Yes 0
SPP1-010
ENSP00000422973
ENST00000508233
D6R9C5 [Direct mapping]
Osteopontin
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001503 [ossification]
GO:0007155 [cell adhesion]
Show all
241 aa
27.1 kDa
Yes 0
SPP1-201
ENSP00000477824
ENST00000614857
P10451 [Direct mapping]
Osteopontin
F2YQ21 [Target identity:100%; Query identity:100%]
Osteopontin-D
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Plasma proteins
Cancer-related genes
   Candidate cancer biomarkers
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001503 [ossification]
GO:0005125 [cytokine activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0007155 [cell adhesion]
GO:0007566 [embryo implantation]
GO:0022617 [extracellular matrix disassembly]
GO:0030198 [extracellular matrix organization]
GO:0031214 [biomineral tissue development]
GO:0033280 [response to vitamin D]
GO:0046697 [decidualization]
GO:0070062 [extracellular exosome]
Show all
292 aa
33 kDa
Yes 0

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