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SMALL INTESTINE - Expression summary

RNA expression
HPA:3.7TPM
GTEx:8.4RPKM
FANTOM5:3.2Tags Per Million

SMALL INTESTINE - Annotated protein expression

Pending normal tissue analysis

SMALL INTESTINE - HPA RNA-seq

Average TPM

3.7
overview Male, age 65 Sample 1
TPM: 0.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39 Sample 2
TPM: 3.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68 Sample 3
TPM: 4.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85 Sample 4
TPM: 5.7

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

8.4

GTEx sample id

Sample description

RPKM
Small Intestine - Terminal Ileum
RPKM: 8.4
Samples: 88

Max RPKM: 42.5
Min RPKM: 1.9
Std RPKM: 6.1
Median RPKM: 6.6
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 42.5
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 25.3
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 21.3
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 20.7
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 20.3
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 16.9
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 16.9
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 16.9
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 16.4
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 14.9
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

3.2

FANTOM5 sample id

Sample description

Tags Per Million
Small intestine
Tags Per Million: 3.2
FF:10024-101D6 15,40,85 years, mixed 3.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.