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ALG5

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:39.3TPM
GTEx:9.4RPKM
FANTOM5:22.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
 

Antibody staining

Antibody HPA007989

  

Endothelial cells

 Medium  

Glandular cells

 Medium  
 

COLON - HPA RNA-seq

Average TPM

39.3
overview Male, age 54 Sample 1
TPM: 49.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 37.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 34.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 31.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 34
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 38.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 47.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 42.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 33.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 47.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 44.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 40.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 30.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

9.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 7.4
Samples: 149

Max RPKM: 12.2
Min RPKM: 4.7
Std RPKM: 1.4
Median RPKM: 7.4
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 12.2
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 11.9
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 10.8
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 10.4
GTEX-13FH7-1626-SM-5J2O9 50-59 years, female 10.2
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 10.2
GTEX-12696-1926-SM-5EGJT 60-69 years, male 10.0
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 9.9
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 9.8
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 9.7
Show all
Colon - Transverse
RPKM: 10.8
Samples: 196

Max RPKM: 22.2
Min RPKM: 2.3
Std RPKM: 3.2
Median RPKM: 10.6
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 22.2
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 20.4
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 20.0
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 18.7
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 18.6
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 18.4
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 17.8
GTEX-ZVP2-1526-SM-5NQ82 50-59 years, male 17.1
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 17.0
GTEX-QMRM-1226-SM-447C6 50-59 years, male 16.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

22.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 22.3
FF:10014-101C5 62,83,84 years, mixed 22.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.