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PTK2B

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:31.5TPM
GTEx:9.3RPKM
FANTOM5:54.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA026091

  

Antibody HPA026276

  

Antibody CAB003850

  

Endothelial cells

 Not detected   Low   Not detected  

Glandular cells

 Medium   Medium   Low  

Peripheral nerve/ganglion

 High   Medium   Not detected  
     
     

COLON - HPA RNA-seq

Average TPM

31.5
overview Male, age 54 Sample 1
TPM: 30.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 40.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 27.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 27.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 27.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 15.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 33
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 36.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 28.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 35.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 40.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 32.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 33
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

9.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 4.1
Samples: 149

Max RPKM: 9.2
Min RPKM: 1.4
Std RPKM: 1.2
Median RPKM: 3.9
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 9.2
GTEX-V955-1726-SM-4JBHF 60-69 years, male 8.6
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 7.7
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 7.2
GTEX-ZAB4-2426-SM-5HL8A 40-49 years, male 7.0
GTEX-XBED-1726-SM-47JYO 60-69 years, male 6.7
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 6.6
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 6.4
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 6.3
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 5.9
Show all
Colon - Transverse
RPKM: 13.3
Samples: 196

Max RPKM: 56.4
Min RPKM: 2.2
Std RPKM: 7.2
Median RPKM: 13.6
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 56.4
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 29.0
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 27.1
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 25.8
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 25.7
GTEX-ZVP2-1526-SM-5NQ82 50-59 years, male 25.7
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 25.2
GTEX-13FTW-1826-SM-5IJEN 40-49 years, male 24.2
GTEX-13PL7-2526-SM-5IFGR 60-69 years, female 24.2
GTEX-12C56-0626-SM-5EGGC 20-29 years, male 23.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

54.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 54.9
FF:10014-101C5 62,83,84 years, mixed 54.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.