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COPS5

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:38.8TPM
GTEx:15.8RPKM
FANTOM5:42.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA004845

  

Antibody CAB004242

  

Endothelial cells

 Medium   High  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 High   High  
   
   

COLON - HPA RNA-seq

Average TPM

38.8
overview Male, age 54 Sample 1
TPM: 36.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 31.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 29.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 39.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 25.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 60.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 50.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 37.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 39.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 46.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 40.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 41.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 27.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

15.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 15.8
Samples: 149

Max RPKM: 23.5
Min RPKM: 6.9
Std RPKM: 2.6
Median RPKM: 15.7
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 23.5
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 22.6
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 21.9
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 20.7
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 20.7
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 20.5
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 20.3
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 20.3
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 20.1
GTEX-ZLV1-1326-SM-4WWER 60-69 years, female 20.1
Show all
Colon - Transverse
RPKM: 15.9
Samples: 196

Max RPKM: 22.4
Min RPKM: 5.4
Std RPKM: 2.3
Median RPKM: 16.0
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 22.4
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 21.8
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 21.3
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 20.8
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 20.0
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 19.9
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 19.9
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 19.8
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 19.5
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 19.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

42.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 42.7
FF:10014-101C5 62,83,84 years, mixed 42.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.